Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq5 145 6e-30 >seq5 Length=3440085 Score = 145 bits (160), Expect = 6e-30 Identities = 277/403 (69%), Gaps = 14/403 (3%) Strand=Plus/Minus Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117 |||||| ||||| | ||||| || || || || || ||||| |||||| Sbjct 1320457 CACGTAGAACTGCGCAAACATG---TGACAAGGCGGCAGCGCCATCTTCTTCAAGTCGGC 1320401 Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30174 ||||||||| |||| || ||||||||| | ||| | ||||| ||| | || || | Sbjct 1320400 GGGGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTGTGGAC 1320341 Query 30175 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30234 ||| || |||||| || || ||| || | |||||| | | ||| ||| Sbjct 1320340 CACCTCGGC---CAGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTGCGGGCGTCGACGTA 1320284 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 ||| || ||||| || | |||||||||||||||||| || |||||||| || | || | Sbjct 1320283 CTCGGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCG 1320224 Query 30295 GTGCTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353 ||| ||| ||||| | |||| | || || | || |||||| ||||||||||||| | Sbjct 1320223 GTGGCCGA-GCCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 1320165 Query 30354 CCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCT 30413 | |||| ||| || ||| || || | || ||||||||||| |||||||| Sbjct 1320164 CGCCCTGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGCAGCTCGG 1320105 Query 30414 CCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | | |||||| ||||| | ||||||||| |||||||| Sbjct 1320104 CGAGCACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGG 1320062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308651976476