Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq191 87.8 2e-12 >seq191 Length=2949 Score = 87.8 bits (96), Expect = 2e-12 Identities = 275/421 (65%), Gaps = 4/421 (1%) Strand=Plus/Minus Query 49010 GCAAGTTCAATAAATTTATCCGGGATAACAACTCCAATAGAAAGCGTCTTTGCACGAACA 49069 ||||||||||| | ||||| || | ||||| || | ||| | || || |||||||| Sbjct 714 GCAAGTTCAATCATTTTATTAGGCACTACAACGCCCAAAGATAAAGTTTTGACACGAACA 655 Query 49070 TCCTCATCCGCAGAAATCTTCTTCGTATCAAGGAAGTCATTGATGTCAGGGTGGAATACG 49129 || ||||| ||| | || || ||| | || ||| |||| || | ||| || || Sbjct 654 TCTTCATCAGCACTTAATTTTTTTGTACTTAAAAAATCAATGATATCGGCGTGAAAAACA 595 Query 49130 TTTAGATACACACTCCCTGATCCTTGTCTTTGTCCCATCTGATCTGCGTAGCGGAATGCA 49189 || | ||| ||| || | ||| | ||||||||| ||||| || || || || Sbjct 594 TTCAAATAAACAGCACCAGCGCCTGTACGTTGTCCCATTTGATCGGCATAACGAAAAATG 535 Query 49190 TTATC-AAGAAGTTTCATAACCCCTACGACGCCTTTAGTAGCGTTCTCT-ACGCCTTTGA 49247 | || || || || || || ||||| || ||||| | | || | | |||||||| Sbjct 534 TGGTCTAATAATTTGCA-CACACCTACAACACCTTT-GCATACACCTTTGATGCCTTTGA 477 Query 49248 TGTCTTCCCCTTTAGCTCGAAGCTTAGTCAGGTTAAGACTCACTCCTCCGCCTAGTTTTG 49307 | ||| ||||| || || | ||||| | ||||| || || ||||| | ||| | Sbjct 476 TAGATTCACCTTTGGCACGCAAATTAGTGATGTTAATCGAAACACCACCGCCAATTTTGG 417 Query 49308 ATAGCTGCATGGACATGTCAACAGCCTTAGAAATATCGTTCAGGGAGTCGTTTACTTCCA 49367 | || ||||| || | ||| | | ||| || |||| |||||| |||| | Sbjct 416 AAAGTTGCATCGAAAATTCATTAATACGGGCAATGTCATTCAAAGAGTCGCCACCTTCTA 357 Query 49368 TCAAGAAGCAGCTTACAAGCTCTCCACGGCGTTTTCTACCAGCATTTAGGAATGTCGGAG 49427 ||| || || |||| || ||||| ||||| | || | ||| || || || |||| Sbjct 356 ACAAAAAACAAGAGACAAATTCGCCACGATGTTTTTTGCCTGTATTAAGCAAAGTGGGAG 297 Query 49428 T 49428 | Sbjct 296 T 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484404262556760