Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5 114 1e-20 >seq5 Length=3440085 Score = 114 bits (126), Expect = 1e-20 Identities = 236/343 (69%), Gaps = 10/343 (3%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || || |||||||| || || || | | || |||| ||| |||||||| |||||| Sbjct 1320062 CCCCTCCTGACGACCAAGCGCGTCTTCCACCGGGCCGTGCTCGCCGAGCTGCTCTGGTTC 1320121 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 || || || || ||| | ||| ||| | ||| || ||||||||||||| Sbjct 1320122 GTCAGCGGCGCGACGTCGTCGCTCTCGCTGTCGGAGCAGGGCGTCAAGATCTGGGACGGC 1320181 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTC--CCATCTCGGGAGGAGGGCGAC 34399 |||| || || || || || ||| |||| |||| || ||| || |||| |||||| Sbjct 1320182 AACGGCTCGCGCGAGTTCCTCGAC-AGCGTGGGGCTCGGCCA--CCGCGAGGCCGGCGAC 1320238 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA--TCGGGGGAGCG 34457 ||||||| || ||||||||||||||| | ||||| || || ||||| || | | || Sbjct 1320239 CTGGGCCCCGTGTACGGGTTCCAGTGGCGCCACTTCGGCGCCGAGTACGTC-GACGCCCG 1320297 Query 34458 AAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGC 34517 | | ||||| | || ||||| | ||||||||| | ||| || ||| || | Sbjct 1320298 CA-CCGACTACGCCGGCCAGGGCGTCGACCAGCTGGCCGAGGTGGTCCACAAGCTGCGGA 1320356 Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCC 34560 |||||| | ||| | | ||| | ||| ||||||||||||| Sbjct 1320357 CGAACCCGTACGACCGCCGCATCATCATGAGCGCGTGGAACCC 1320399 Score = 114 bits (126), Expect = 1e-20 Identities = 236/343 (69%), Gaps = 10/343 (3%) Strand=Plus/Minus Query 6785 GGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATC 6844 ||||||||||||| ||| | ||| | | ||| | |||||| | || ||| || | Sbjct 1320399 GGGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTGTGGACC 1320340 Query 6845 ACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGA--TACT 6902 || | ||||||||| | ||||| || | ||||| | | || | | || |||| Sbjct 1320339 ACCTCGGCCAGCTGGTCGACGCCCTGGCCGGCGTAGTCGG-TGCGGGCGTC-GACGTACT 1320282 Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962 | || || ||||| | ||||||||||||||| || ||||||| |||||| |||| || Sbjct 1320281 CGGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGG- 1320223 Query 6963 ATGG--GAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019 ||| || |||| |||| ||| || || || || || |||| ||||||||||||| | Sbjct 1320222 -TGGCCGAGCCCCACGCT-GTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 1320165 Query 7020 CCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCT 7079 | ||| | ||| ||| | ||| || || || |||||||| |||||||| Sbjct 1320164 CGCCCTGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGCAGCTCGG 1320105 Query 7080 CGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 ||| |||| || | | || || || |||||||| || || Sbjct 1320104 CGAGCACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGG 1320062 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 ||||||||||| || || || | || ||||| || ||||||||||||||||| || || Sbjct 1320545 TGCCAGCTCTACCAGCGGTCATGCGATATGGGCTTGGGGGTGCCGTTCAACATCGCCAGC 1320604 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGGT 34755 || || || | || ||||||| || ||||| ||| | | | ||||| || || | | Sbjct 1320605 TATGCGCTCTTGACCCACATGATTGCACATGT-GTGCGATCTTGTTCC-AGGTAGTTTG- 1320661 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 || | || |||| ||||||||| | || ||||| ||| |||| ||| ||| Sbjct 1320662 ACACAGGTCATGGGTGATGCGCATGTATATTGTGACCACGTCGGTGCGCTCAGGACACAG 1320721 Query 34814 CTGCAACGAGAGCCCCG 34830 ||| | |||||||||| Sbjct 1320722 CTGGAGAGAGAGCCCCG 1320738 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 6515 CGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCA 6574 |||||||||| | |||||| ||| |||| ||| ||||| || | ||||||| Sbjct 1320738 CGGGGCTCTCTCTCCAGCTGTGTCCTGAGCGCACCGACGTGGTCACAATATACATGCGCA 1320679 Query 6575 TCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCA-ACCCCACGACATGAGCGATCATG 6631 || |||| || | || | | || || ||||| | | | ||| ||||| || |||||| Sbjct 1320678 TCACCCATGACCTGTGT-CAAACTACCT-GGAACAAGATCGCAC-ACATGTGCAATCATG 1320622 Query 6632 TACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGAT 6691 | || | || || || || || ||||||||||||||||| || ||||| || | || Sbjct 1320621 TGGGTCAAGAGCGCATAGCTGGCGATGTTGAACGGCACCCCCAAGCCCATATCGCATGAC 1320562 Query 6692 CGTTGATAGAGCTGGCA 6708 || || ||||||||||| Sbjct 1320561 CGCTGGTAGAGCTGGCA 1320545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448260422042160