Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq5 134 3e-26
seq4 120 7e-22
seq2 116 9e-21
seq3 111 4e-19
>seq5
Length=3440085
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || || || || || |||| ||||| || | || || | ||||||
Sbjct 3138266 AGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCATCT 3138207
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| ||||||||||| || || || ||||| || || ||||| ||||||||
Sbjct 3138206 TCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATACCCTCCTTGTCC 3138147
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| |||||| ||||||||||| |||| ||||| || | || ||||||
Sbjct 3138146 TGAATCTTGCTCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGTGTTATCGTC 3138087
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| || || | ||| | |||||
Sbjct 3138086 TTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || |||| ||||| |||| | || | || ||
Sbjct 3137810 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 3137751
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| | || || ||||| || || || || ||||||||
Sbjct 3137750 TCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCC 3137691
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||| ||||| || | ||||| || | ||||| |||
Sbjct 3137690 TGAATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCCACCTCGAGGGTGATGGTC 3137631
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | |||||
Sbjct 3137630 TTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3137599
>seq4
Length=3484069
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| || || | ||||| || |||||||| || ||||||||
Sbjct 949905 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 949846
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| ||| || ||||| || || || || |||||||| |||||||| ||| ||| |||
Sbjct 949845 AATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 949786
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| |||| || || || | ||||| ||||||||||||| || || | |||
Sbjct 949785 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 949727
>seq2
Length=4895233
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || ||||| || ||| || || |||| ||||| |||| | ||
Sbjct 4675590 ACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGT 4675531
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || |||||||| || || || |||||||| || || ||
Sbjct 4675530 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCC 4675471
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||| ||| ||||||||||| |||| ||||| || |
Sbjct 4675470 CTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACCTCAAG 4675411
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| ||||| | || || | ||| | |||||
Sbjct 4675410 GGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 4675369
>seq3
Length=3828249
Score = 111 bits (122), Expect = 4e-19
Identities = 189/274 (69%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 193489 TTCCCGTGTGTTTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCA 193548
||||| || ||||||||| |||| || | ||| || ||||||| ||||||||
Sbjct 3341889 TTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGT 3341948
Query 193549 TGCCCACCTCCGCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCG 193608
|||| ||| | || || |||| ||| | ||| || | ||||| |||| |||
Sbjct 3341949 TGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCT 3342008
Query 193609 TTCTGGCCTTTCCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGA 193668
| | | | ||||| ||||||||||| |||||||| |||| || || | ||||||
Sbjct 3342009 TGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGC 3342068
Query 193669 TTTCGTCGAGACCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCA 193728
||| | || ||||| || || ||||| | ||| |||| || || | | || |
Sbjct 3342069 ATTCAGCAAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAA 3342128
Query 193729 CCCTCTTCATGAAGAGGTCAGATGTCCAAATGGC 193762
||| ||||||||||||||||| |||| | |||
Sbjct 3342129 CCCGCTTCATGAAGAGGTCAGGAATCCAGAGGGC 3342162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192525806404982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |