Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 >seq5 Length=3440085 Score = 111 bits (122), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 |||| || | |||||||||||||||||| || |||||||| || | || | ||| ||| Sbjct 1320275 CGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGGTGGCCGA 1320216 Query 30075 AGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30133 ||||| | |||| | || || | || |||||| ||||||||||||| || |||| | Sbjct 1320215 -GCCCCACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCTGC 1320157 Query 30134 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193 || || ||| || || | || ||||||||||| |||||||| | | ||| Sbjct 1320156 TCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGCAGCTCGGCGAGCACG 1320097 Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 ||| ||||| | ||||||||| |||||||| Sbjct 1320096 GCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGG 1320062 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 29623 GGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATC 29682 |||||| ||||| ||||| |||| |||| | ||||||||| || || || ||||| Sbjct 1320736 GGGCTCTCTCTCCAGCTGTGTCCTGAGCGCACCGACGTGGTCACAATATACATGCGCATC 1320677 Query 29683 TCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 29741 |||| | || | |||||| || || | || || || || || ||||||| | Sbjct 1320676 ACCCATGACCTGTGTCAAACTA-CCTGGAACAAGATCGCACACATGTGCAATCATGTGGG 1320618 Query 29742 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCT 29801 | | ||| | |||||||||||||| || |||||||| | ||||| || | ||||| || Sbjct 1320617 TCAAGAGCGCATAGCTGGCGATGTTGAACGGCACCCCCAAGCCCATATCGCATGACCGCT 1320558 Query 29802 GGTAGAGCTGGCA 29814 ||||||||||||| Sbjct 1320557 GGTAGAGCTGGCA 1320545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161452609758