Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 163 6e-35
seq2 159 7e-34
seq60 158 3e-33
seq4 147 5e-30
seq1 136 8e-27
seq15 93.3 9e-14
>seq5
Length=3440085
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || || || || | ||| || || |||||||||||||| |
Sbjct 3137826 ACCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 3137767
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || || || ||||||||||| || |||||| ||
Sbjct 3137766 GAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGG 3137707
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || ||| | ||||||||||| |||| || ||
Sbjct 3137706 GATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCCAC 3137647
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 3137646 CTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3137599
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || |||| || | || || || |||||||||||||| |
Sbjct 3138054 ACCACCACGGAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 3137995
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||||||||||| || || ||||| ||
Sbjct 3137994 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGG 3137935
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || ||| | ||||||||||| || | |||||
Sbjct 3137934 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCGAC 3137875
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || || | ||||| ||||| || |||||
Sbjct 3137874 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 3137827
Score = 161 bits (178), Expect = 2e-34
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | || || || ||||||||||||||||
Sbjct 3138281 CCACCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3138222
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| |||||||| || | || || || || ||||| | ||| || ||||| ||
Sbjct 3138221 AGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 3138162
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| || ||| ||||| || ||| | ||||| |||||||| | || ||
Sbjct 3138161 ATACCCTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCGATGGTGTCCGAGGACTCCAC 3138103
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || |||||||| |||||||| ||||| ||||| ||||||||
Sbjct 3138102 CTCCAGTGTTATCGTCTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 3138055
>seq2
Length=4895233
Score = 159 bits (176), Expect = 7e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| | || || || | ||||| || || |||||||||||||| |
Sbjct 4675596 ACCACCACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 4675537
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || ||||| ||||||| || || ||||| ||
Sbjct 4675536 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGG 4675477
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || || | ||||| |||||||| | || ||
Sbjct 4675476 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCAC 4675417
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 4675416 CTCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 4675369
>seq60
Length=13814
Score = 158 bits (174), Expect = 3e-33
Identities = 256/364 (70%), Gaps = 16/364 (4%)
Strand=Plus/Minus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485
||| | || || ||||| || || ||||| || || |||||||| |||||| || ||
Sbjct 12321 AAACTAGATCCTTATATTAATGTTGATCCTGGAACAATGAGCCCTTATCAACACGGTGAG 12262
Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545
|| || || || ||||||||||||||||| ||||| ||| |||| || || ||| | ||
Sbjct 12261 GTCTTTGTCACTGATGATGGTGCTGAAACTGATCTTGATTTGGGTCATTATGAAAGATT- 12203
Query 301546 ACTTCATTAACCCTTAAGCGTGAAAGT--AATTTTACGACTGGCCAAGTTTATTTAAAAG 301603
| || || | | ||| ||||| || | || | || ||| ||||| || |
Sbjct 12202 TTTAGATGAAAACATGAGC-AAAAAGTCAAACGTCACTGCAGGGCAAATTTATCAAAGTG 12144
Query 301604 TTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCACA 301663
||||| | || ||||| ||||||| || | || || || || ||||| |||| ||||
Sbjct 12143 TTATCAATAAAGAACGTGAAGGTAAATACTTAGGTAAAACCGTTCAAGTAATTCCACACA 12084
Query 301664 TCACCGATGAAATCA---AAAGAAGAATTCACATTGCGGC------TGAAAAATCAGATA 301714
|||| || ||||||| ||| | |||| | ||| || | | ||||| |||
Sbjct 12083 TCACTGAAGAAATCAAACAAAAACTAATTGA---TGCTGCTCTTTTTCATAAATCTGATG 12027
Query 301715 TACTTATTGGAGAAATTGGAGGAACGGTCGGAGATATCGAATCGCTTCCTTTTATAGAAG 301774
| |||||| |||||||||||| || || ||||| || ||||| |||||| ||||||
Sbjct 12026 TTGTTATTGTAGAAATTGGAGGCACTGTAGGAGACATTGAATCATCGCCTTTTTTAGAAG 11967
Query 301775 CGAT 301778
| ||
Sbjct 11966 CTAT 11963
>seq4
Length=3484069
Score = 147 bits (162), Expect = 5e-30
Identities = 140/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || |||||||||||||| || || || ||||| ||||||
Sbjct 949905 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 949846
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || || |||||| || || ||||||||||| |||||||| | || || | |||
Sbjct 949845 AATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 949786
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| || | ||||| || || ||||| ||||| ||||||| ||||| |||||
Sbjct 949785 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 949727
>seq1
Length=5395810
Score = 136 bits (150), Expect = 8e-27
Identities = 179/248 (72%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| |||| || | || || | ||| ||||||||| | || ||| |||| ||| ||
Sbjct 863501 ATCATCACTGATGCCGTCGCCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCCTGCAGT 863442
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
|| |||||||||| || | || ||| ||| || ||||| ||||| || || ||| |
Sbjct 863441 CTGCTCGGCATGAACGCCAACCTGATGAAGCAGTACATCGAGTTCGTGGCCGACCGTCTC 863382
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
|||| || || || ||||||| || || || |||| |||||||||| || ||||||
Sbjct 863381 CTCGTCGCCCTTGGCAACGAGAAGGTCTACAAGTCCACCAACCCCTTCGACTTCATGGAG 863322
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402
||| || || || || || ||||||||||| ||||||||| | || || || | |
Sbjct 863321 AACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAG 863262
Query 230403 CCCGGTGT 230410
|||||||
Sbjct 863261 GCCGGTGT 863254
>seq15
Length=682953
Score = 93.3 bits (102), Expect = 9e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| || || | ||| |||| || || | ||| || || ||||| || |||||
Sbjct 323052 GGGAAACCCTCGACCTGCTCGTTGTTGATAGCACGCATGAGGGTGGACTTTCCGGCACCG 322993
Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148
||||| ||||||||||| || || || ||| || | ||||||| |||| ||
Sbjct 322992 TTGGGACCGCAAAGACCGTAGCGTCGACCACGCTTGAGGCGGAGACGGGTGCTGTTGAGG 322933
Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCG 317199
|||||||| |||| || || || ||||||||||| || || |||| ||||
Sbjct 322932 AGAATCTTGGCACCGTAGGCGAGGGAGAACTCACACTCGCAGAGGTTCTCG 322882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046734465794862
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