Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq88 170 4e-37
>seq88
Length=140259
Score = 170 bits (188), Expect = 4e-37
Identities = 316/461 (69%), Gaps = 6/461 (1%)
Strand=Plus/Minus
Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCA 230239
||||||| || |||| | |||||| ||||| | || ||| |||| | |||
Sbjct 57340 AGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCA 57281
Query 230240 TCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCA 230299
|||| |||||| ||| ||| |||||||||| || | || |||||| | |||
Sbjct 57280 TCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATCT 57221
Query 230300 GTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACA 230359
||| ||||||||||| || | |||| || ||| || | || ||||
Sbjct 57220 CTCGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCTGAGGAACC 57161
Query 230360 AGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGG 230416
| ||| | || || ||| | | ||||| || || || || | | || ||||
Sbjct 57160 GCC--CCAG-CAAGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCGTCATTGAGAAGG 57104
Query 230417 AGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGAC 230476
||||| | || ||| |||| || | || | ||||||||||| | || ||| |
Sbjct 57103 AGTTCTTGACCGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGATGAAGC 57044
Query 230477 AGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACA 230536
|||||||||| ||||| |||||||| | |||| || ||||| ||||||| || ||||
Sbjct 57043 AGTACATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACGAGAAGGTCTACA 56984
Query 230537 ACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCT 230596
| |||| |||||||| | || |||||| ||| || ||| || |||||||||||||
Sbjct 56983 AGTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCT 56924
Query 230597 TCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||| ||||||||| ||||||| |||| | | ||||| |||
Sbjct 56923 TCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGTCATG 56883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057817562149250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |