Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq14 190 2e-43 >seq14 Length=442650 Score = 190 bits (210), Expect = 2e-43 Identities = 1181/1892 (62%), Gaps = 21/1892 (1%) Strand=Plus/Plus Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855 |||| ||| | ||||| |||||||| || | || | | || || || |||||||| Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196 Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTC 52915 || || || ||||| || |||| ||| || ||||| || || | ||| | Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256 Query 52916 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 52975 || || || ||||| || | ||| || || ||||||||||| || | ||| ||| Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316 Query 52976 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 53035 | ||| | | |||||| | || | | |||||| | || || || | ||| ||| Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376 Query 53036 TCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTG 53092 || | || | | | | | ||||| ||||| ||| | || | || || | ||||| Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436 Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 || | ||| ||| | |||| || | | || || || || || || || Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 || || || |||| | || | || ||| || ||| ||| || || || | || Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 || || || |||| ||| || | || ||||| || ||||| || |||| ||| || || Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616 Query 53273 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 53330 |||| | ||||| | || |||| || | || | || ||||| | ||||||||| | Sbjct 87617 TTTCGGATACCGT--GCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674 Query 53331 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 53390 | || || ||| || || | | || ||||| | | Sbjct 87675 AAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGT 87734 Query 53391 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 53450 |||| | |||||| || || || || | || ||| ||| || ||| ||| | Sbjct 87735 ATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGT 87794 Query 53451 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 53510 | ||||| |||||||||| || || || | | || || || |||||||| | Sbjct 87795 AGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGC-ATG 87853 Query 53511 TTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569 |||| | || || || || | || || ||||||| ||| || || || |||| | Sbjct 87854 CGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGC 87913 Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629 | || | | | || || | || || | || | ||| || || || || ||| Sbjct 87914 ATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGG 87973 Query 53630 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----TTGTCCATC 53685 || | |||| || | | || || | || | | || | | |||| Sbjct 87974 TTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCG 88033 Query 53686 TATTACAAACATGTT--CAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCA 53743 || | | | ||| | || ||||| || ||||| || || || || ||||||| || | Sbjct 88034 TAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGA 88093 Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803 | || | || ||||| ||||| || || | ||||||||| | || | Sbjct 88094 GCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTC 88153 Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 || || ||||| ||| || |||||||| || || ||||| || | || || || || Sbjct 88154 TGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTC 88213 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923 |||| || | || || | ||| | ||||||| || | | | | Sbjct 88214 TGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCT 88273 Query 53924 TCTCTTTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT- 53980 ||||| ||||| | ||| | | | || |||||||| || | || | ||| Sbjct 88274 TCTCTCTCGTACTTCTCGTACAGAGCC--TCGAACTCGTCACCGTAG-CAGTCAGCAAGG 88330 Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 ||||| || || | || ||||| | | ||| || |||| | || || || ||||| Sbjct 88331 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 88390 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 ||||| ||||||||||| ||||| | || || || | || || ||||| || || Sbjct 88391 AAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCG 88450 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 |||||| | ||||||||| | | | ||||| ||||| || |||| ||| || Sbjct 88451 TGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 88510 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | | ||||| || || || || ||||| || | ||| | || ||||| || | Sbjct 88511 GCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAG 88570 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | | ||| ||||| ||||| || || | || ||||| |||| ||| || ||| Sbjct 88571 ACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCA 88630 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 ||||||| ||| | ||||| || || || ||||| || ||||| | ||| Sbjct 88631 GTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCG 88690 Query 54341 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 54400 || || | ||||| ||||| || || ||||| |||||| |||||| | || || Sbjct 88691 CAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAG 88750 Query 54401 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 54460 || |||| || | | || || ||||| || | ||||| || |||||||| Sbjct 88751 CACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTG 88810 Query 54461 AACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGA 54520 || |||| | || | || ||||||||||| ||| || || ||||| | Sbjct 88811 AAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAG 88870 Query 54521 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 54580 || || || || |||||||| | ||||||||| || | ||| |||| ||| | | Sbjct 88871 ATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGC 88930 Query 54581 TTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 54640 || || | ||| || ||||| || || || || || || | || |||||||| Sbjct 88931 TTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGG 88990 Query 54641 TCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672 || || | ||| | |||| ||| | ||||| Sbjct 88991 TCATATACAATGGCAGAGTCGAGCTCGTCCTT 89022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718074778000