Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2 196 6e-45 >seq2 Length=950389 Score = 196 bits (216), Expect = 6e-45 Identities = 288/404 (71%), Gaps = 8/404 (2%) Strand=Plus/Minus Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924 || |||||||||||| ||| | | ||| || |||||||| ||||| || ||| | Sbjct 623845 CGACACGTAGAACTGCGCAAAC-ATGTGACAAGGCGGCAGCGCCATCTTCTTCAAGTCGG 623787 Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCC 145981 | |||||||| ||| | | || || | | || ||| |||||| || | || Sbjct 623786 CGGGGTTCCACGCGCTCATGATGA---TGCGGCGGTCGTACGGGTTCGTCCGCAGCTTGT 623730 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGT 146041 | | || |||||||| |||||||| ||| ||| || || || ||| |||| Sbjct 623729 GGACGACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCGACGT 623670 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCC 146101 || |||| |||||||| | ||||||||||||||| ||||| |||||||| |||| ||| | Sbjct 623669 ACTCGGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGC 623610 Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161 ||| || |||||| | | | ||||||| || || || |||||| ||||||||||||||| Sbjct 623609 GGTGGCCGAGCCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 623550 Query 146162 CGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTT 146221 ||||| | | || ||| || ||| | || |||| ||||||||| ||||| Sbjct 623549 CGCCCTGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGGAGCTCGG 623490 Query 146222 CGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGG 146265 |||| || ||| |||||| | |||||| ||||| |||||| Sbjct 623489 CGAGCACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGGG 623446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073296419000