Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 4e-20
>seq4
Length=784365
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | ||| |||||||| |||||||| ||||| | |
Sbjct 46938 CCACCACGAAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 46997
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | ||||||| ||||| || || ||| | || || | ||||||||| |||
Sbjct 46998 AGAGTACGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCGGGGGGG 47057
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| ||| || || |||
Sbjct 47058 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAGGACTCGACC 47117
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || ||||||||||| || | || |||||||| ||||||||
Sbjct 47118 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 47164
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||||||||| || ||||| ||||| | ||||| || ||||||| ||||| || ||
Sbjct 47196 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCG 47255
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || | ||||||||| || | || |||||||| ||||| ||
Sbjct 47256 GCAAAGATCAGGCGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTG 47315
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| ||| || | |||| || | ||| |||||||||||||| | ||
Sbjct 47316 ACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 47375
Query 21159 TTGACAAATATTTGCAT 21175
||||| || || |||||
Sbjct 47376 TTGACGAAGATCTGCAT 47392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422256755515100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |