Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq14 370 9e-98 seq88 116 3e-21 seq4 104 2e-17 seq80 86.0 6e-12 >seq14 Length=442650 Score = 370 bits (410), Expect = 9e-98 Identities = 1227/1889 (65%), Gaps = 40/1889 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| ||| |||| | ||||| || || |||||||| Sbjct 87139 CTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCC 87198 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||||| |||||| || || || || || | || || | || Sbjct 87199 AGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTGGG 87258 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| ||||| ||| ||||| || || || || || || | Sbjct 87259 CTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCAGA 87318 Query 22285 CATATTTATCAAT-GTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | | |||| || | | || | |||||| ||||||||||||| | |||| | Sbjct 87319 CATCTGCA-CAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATAT 87377 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 | ||| || ||| |||||| || || | | | ||||| || || | Sbjct 87378 CGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTCA 87437 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 | | || ||||| ||| || | |||| || ||| || |||| || || | Sbjct 87438 TAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACCT 87497 Query 22464 GAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 | |||||||| | |||| || || || ||||| ||||| || ||| | || ||||| | Sbjct 87498 GGAACTCGCCAG-CAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 || ||||| ||||| ||||| | || || ||||| ||||| ||||||| || | | Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616 Query 22583 TTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640 |||| | ||||||| |||| ||| || |||||| ||||||||| ||||| | Sbjct 87617 TTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATC--CCAGTCCCAAAGATCAG 87674 Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCC 22698 | ||| || | ||||||| || ||||| | | || |||| || ||| | || Sbjct 87675 AAGGCTGGAC---GCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGG-GGGATCCC 87730 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758 | |||| || | ||| || || | | | ||| | ||||| ||| ||| || | Sbjct 87731 T-CGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGC 87789 Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GC----GGCGACGCTTTCG 22813 || || || ||||||||||| | ||||||| | |||| || || ||| || Sbjct 87790 GTGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCT-GGCGAGCCTCAGGGGAC----TCA 87844 Query 22814 TACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGT 22873 | ||||| || | || ||| || || || | |||||| || || | ||| || || Sbjct 87845 AATGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGC 87904 Query 22874 CGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTT 22933 | || | || || | |||||| || || || || ||| || | Sbjct 87905 CTGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATC 87964 Query 22934 CTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACG 22993 |||||| ||| | || | | || | | |||| ||| | Sbjct 87965 TTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAG 88024 Query 22994 CCCGATT-GTA--CAACAAACTTGTTGACGGCG--ATCGAGGCAAGATTGCATACGGCCA 23048 || ||| ||||| | || || | | | || ||||| || ||||| || |||| Sbjct 88025 TTGTTTTCGTAGTCAACATA--TGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCA 88082 Query 23049 CCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGC 23108 |||| || | |||||| | || ||||| || || ||| | || || | Sbjct 88083 CCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTC 88142 Query 23109 CCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGC 23168 ||| || |||||||||| || || ||||| | |||||||||||||||| | || ||| Sbjct 88143 CCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGC 88202 Query 23169 CCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCA 23228 | |||||| ||| | ||||| ||| || ||||| ||||||| | | ||| Sbjct 88203 CGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATG-GTCTTG 88261 Query 23229 CGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAG 23287 || | | ||||||| ||||||||| | ||||| || || || ||| ||||||| ||| Sbjct 88262 CGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAG 88321 Query 23288 TCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACG 23347 || || ||||| || | | | || |||||||| |||| || || ||||| Sbjct 88322 TCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACC 88381 Query 23348 CGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCC 23407 || |||| || || || || ||||| ||||| ||| || |||||||| || |||||| Sbjct 88382 CGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCC 88441 Query 23408 TCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCG 23467 || || ||| ||||||| ||| || | || || || || || || ||||| ||||| Sbjct 88442 TCCTTACCGTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCC 88501 Query 23468 AGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 ||||| | || || || || || | |||||| || ||||| || ||||||||||| ||| Sbjct 88502 AGGTAGATAGCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTG 88561 Query 23528 TTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA 23587 |||||| | || | ||||| || | || |||||| |||| |||| || || | Sbjct 88562 TTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATG 88621 Query 23588 CTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 || || | || || | ||| |||| | ||| || |||||| || || || Sbjct 88622 TAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAG 88681 Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 ||||| ||||| || ||||| |||||||| || || || ||||| || || | || Sbjct 88682 ATCATGGCGCAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCG 88741 Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 || | ||| ||||| |||| || | | ||||||| | || ||||||||| || Sbjct 88742 ACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGAT 88801 Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827 |||||||| ||| || | |||||| || |||||||| || || | ||||| || Sbjct 88802 GCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCA 88861 Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGAC- 23886 ||||| ||||| | || || ||||| ||||||| || || | ||||| ||| Sbjct 88862 TCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGAC---GACT 88918 Query 23887 --GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAG 23944 ||| | | |||| || ||||| || | || || || || || || || | |||| Sbjct 88919 TTGCCATCGAGCTTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAG 88978 Query 23945 TTAAAGTCACGATCGTGCACTATGGCCGA 23973 ||||| || || | || ||||| || Sbjct 88979 CCGAAGTCTCGGTCATATACAATGGCAGA 89007 >seq88 Length=140259 Score = 116 bits (128), Expect = 3e-21 Identities = 283/421 (67%), Gaps = 16/421 (4%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGAT 58039 || ||||| || || || ||||| ||||| || ||||| || | || || ||| | Sbjct 57329 GCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGT-GCTTTCGCCTCCATCTTCTGGCT 57271 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| ||||| ||||||| || ||||| || ||||||| |||| || || ||||| Sbjct 57270 GAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATCTCTCGTGACGA 57211 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGC- 58158 |||||| || ||||| || || ||||| ||| ||||||| | | ||||| | | Sbjct 57210 GGGTCTGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCT----GAGGAACCGCCCCA 57155 Query 58159 ---GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCA 58215 || || || | | || ||||| || || |||| || || || ||||| | | Sbjct 57154 GCAAGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTCTTGA 57095 Query 58216 CCGAAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 |||| || | | || | | | ||||||| |||||| | ||||| ||||||| Sbjct 57094 CCGAGGCTCTTCCCTGCAGTC-TGCTCGGCATGAACGCCAACCTGATGAAGCAGTACATC 57036 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || |||||| | || | ||| || | |||| ||| ||||| | | Sbjct 57035 GAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACGAGAAGGTC--TACAAGTCTA 56978 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAA 58392 || || || || || ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 56977 CCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGA 56918 Query 58393 A 58393 | Sbjct 56917 A 56917 >seq4 Length=784365 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || ||||| || ||||| | || || || | ||| Sbjct 47164 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 47105 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 47104 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 47045 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || || || ||| | || ||| | ||| || ||| || ||| Sbjct 47044 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGTCGTACTCTGTCCGACTACAAC 46985 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| || |||| || Sbjct 46984 ATTCAGAAGGAGTCTACTCTCCACTTGGTTCT 46953 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| |||| || || | || Sbjct 47393 CATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTC 47334 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 47333 CGACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCTGACCA 47274 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || || || || ||| | || ||| || | ||| || || Sbjct 47273 GCAGCGCCTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAA 47214 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| || || || | || | ||||||| Sbjct 47213 CATCCAGAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTCCGTGGCGGTA 47164 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/158 (73%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || |||||||| || | || || || | || Sbjct 46936 ATGCAGATCTTCGTCAAGACATTGACGGGAAAAACGATAACACTAGAGGTGGAGTCCTCA 46877 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| | || | || || ||| || | | ||||||||| || | || || ||| Sbjct 46876 GACACCATTGACAACGTGAA---GAGCAAGATCCAGGACAAGGAGGGAATCCCACCAGAC 46820 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| || |||||||| || ||||||||||| Sbjct 46819 CAGCAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAAGA 46782 >seq80 Length=149332 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || || || || |||||| | || || || | || Sbjct 52684 CATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACCCTTGAGGTGGAGTCCTC 52743 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| ||| | || |||||||| Sbjct 52744 GGACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCA 52803 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||| || || ||||| ||||| ||| | || ||| Sbjct 52804 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAC 52840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763753262000