Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq14 187 3e-42 seq88 89.7 6e-13 >seq14 Length=442650 Score = 187 bits (206), Expect = 3e-42 Identities = 629/972 (65%), Gaps = 8/972 (1%) Strand=Plus/Plus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| || ||||| || || || || ||||||| || | | || | || ||||| Sbjct 88055 GCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCG 88114 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||| || || | ||| ||||| | || | || || ||||| ||| || Sbjct 88115 GTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 88174 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 |||||||| || || ||||| || | || || || |||| | || | || || | | Sbjct 88175 GCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTAC 88234 Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTA--TAGAGTA 63179 || | | || ||||||| || | | | | |||||| ||||| | ||| Sbjct 88235 CACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTA 88293 Query 63180 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CTAGGACATTCATCCGGACA 63238 | | | ||||||||||| || | || | ||| | ||| || || | || || Sbjct 88294 CAGAGCC--TCGAACTCGTCACCGTAG-CAGTCAGCAAGGCCAGGGCACTCGTTGGGGCA 88350 Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 ||| | | ||| || |||| | || || || ||||| ||||| ||||||||||| || Sbjct 88351 CATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAG 88410 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 ||| | || || || | | || ||||| || || |||||| | ||||| Sbjct 88411 AGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAG 88470 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 |||| | | | ||||| ||||| || |||| ||| || || | | | ||||| || || Sbjct 88471 GAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTT 88530 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 || || ||||| || | ||| | || ||||| || | || | | ||| ||||| || Sbjct 88531 ATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAT 88590 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAAT 63538 ||||||||| | || |||||||||| ||| || ||| ||||||| ||| | Sbjct 88591 ACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGAC 88650 Query 63539 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63598 ||||| || || || ||||| || ||||| | ||||| || | || || || Sbjct 88651 GTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTA 88710 Query 63599 GATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63658 ||| ||||| || || ||||| |||||| | || || || |||| || | | Sbjct 88711 GATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTG 88770 Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718 | || || ||||| || | ||||| || |||||||| || |||| | || | || Sbjct 88771 GGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAG 88830 Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63778 ||||||||||||||| || || ||||| | || || || || |||||||| Sbjct 88831 GTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCAT 88890 Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838 | ||||||||| || | ||| || | |||| | | || | | ||| || || Sbjct 88891 GATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTC 88950 Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 ||| || || || || || || | || |||||||| || || | ||| | || | Sbjct 88951 CAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTC 89010 Query 63899 GAGCTTATCCTT 63910 ||||| ||||| Sbjct 89011 GAGCTCGTCCTT 89022 Score = 91.5 bits (100), Expect = 2e-13 Identities = 348/544 (64%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093 |||| ||| | ||||| |||||||| || | || | | || || || |||||||| Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196 Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62153 || || || ||||| || |||| ||| || ||||| || || | ||| | Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256 Query 62154 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62213 || || || ||||| || | ||| || || ||||||||||| || | ||| ||| Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316 Query 62214 GCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62273 | ||| | | |||||| | || | | |||||| | || || || | ||| ||| Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376 Query 62274 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTG 62330 || | || | | | | | ||||| || || ||| | || | || || | ||||| Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436 Query 62331 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACT 62390 || | ||| ||| | |||| || | | || || || ||||| || || Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496 Query 62391 TGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62450 ||||| || |||| | || | || ||| || ||| ||| || || || | || Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556 Query 62451 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62510 || || || |||| ||| || | || ||||| || ||||| || |||| ||| || || Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616 Query 62511 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCG 62568 |||| | |||| || || |||| || | || | | ||||| | ||||||||| | Sbjct 87617 TTTCGGATACCG--TGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674 Query 62569 ACGG 62572 | || Sbjct 87675 AAGG 87678 >seq88 Length=140259 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || || ||||| || ||||||||||||||| | | || | ||||| || Sbjct 57178 AACAGCAGGCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 57237 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || || || || ||||| | || ||||| || ||||| || ||||| ||||| | ||| Sbjct 57238 AAGGTCAGACCAGGCATCAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCG 57297 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33749 |||||||| || || || ||||| ||||||| || | || | || | || Sbjct 57298 CTGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGAGCGTAGGTAGACTCG 57357 Query 33750 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787 ||| |||||||| | ||||| ||||||||||| Sbjct 57358 TGGTCCGTGATCCACTTCAGGGCCCAGTCGGCCTTCTT 57395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629813860458000