Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq14 179 5e-40
>seq14
Length=442650
Score = 179 bits (198), Expect = 5e-40
Identities = 1183/1893 (62%), Gaps = 23/1893 (1%)
Strand=Plus/Plus
Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886
|||| ||| | ||||| |||||||| || | || | | || || || ||||||||
Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196
Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946
|| || || ||||| || |||| ||| || ||||| || || | ||| |
Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256
Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006
|| || || ||||| || | ||| || || ||||||||||| || | ||| |||
Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316
Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066
| ||| | | |||||| | || | | |||||| | || || || | ||| |||
Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376
Query 65067 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123
|| | || | | | | | ||||| || || ||| | || || || || | |||||
Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436
Query 65124 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 65183
|| | ||| ||| | |||| || | | || || || || || || ||
Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496
Query 65184 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 65243
|| || || |||| | || | || ||| || ||| ||| || || || | ||
Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556
Query 65244 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 65303
|| || || |||| ||| || | || ||||| || ||||| || |||| ||| || ||
Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616
Query 65304 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 65361
|||| | ||||| | || |||| || | || | || ||||| | ||||||||| |
Sbjct 87617 TTTCGGATACCGT--GCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674
Query 65362 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 65421
| || || ||| || || | | || ||||| | |
Sbjct 87675 AAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGT 87734
Query 65422 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 65481
|||| | |||||| || || || || | || ||| ||| || ||| ||| |
Sbjct 87735 ATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGT 87794
Query 65482 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT 65541
| ||||| |||||||||| || || || | | || || || |||||||| |
Sbjct 87795 AGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGC-ATG 87853
Query 65542 TTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 65600
|||| | || || || || | || || ||||||| ||| || || || |||| |
Sbjct 87854 CGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGC 87913
Query 65601 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 65660
| || | | | || || | || || | || | ||| || || || || ||
Sbjct 87914 ATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGG 87973
Query 65661 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCTCATCTAT 65719
|| | |||| || | | || || | || | | || | | | | | | |
Sbjct 87974 TTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCG 88033
Query 65720 TA--CAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 65774
|| ||| | ||| | || |||| || ||||| || || || || ||||||| || |
Sbjct 88034 TAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGA 88093
Query 65775 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 65834
| || | || ||||| ||||| || || | ||||||||| | || |
Sbjct 88094 GCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTC 88153
Query 65835 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 65894
|| || ||||| ||| || |||||||| || || ||||| || | || || || ||
Sbjct 88154 TGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTC 88213
Query 65895 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT 65953
|| | || | || || | ||| | | || ||||||| || | | |
Sbjct 88214 TGGGCCTCGAGGATGGCGTACCACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCC 88272
Query 65954 TTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 66011
|||||| ||||| | ||| | | | ||||||||||| || | || | |||
Sbjct 88273 TTCTCTCTCGTACTTCTCGTACAGAGCC--TCGAACTCGTCACCGTAG-CAGTCAGCAAG 88329
Query 66012 -CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 66070
||||| || || | || ||||| | | ||| || |||| | || || || |||||
Sbjct 88330 GCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCAT 88389
Query 66071 AAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCC 66130
||||| ||||||||||| ||||| | || | || | || || ||||| || ||
Sbjct 88390 GAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACC 88449
Query 66131 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATAT 66190
|||||| | ||||||||| | | | |||| ||||| || |||| ||| ||
Sbjct 88450 GTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGAT 88509
Query 66191 GGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 66250
|| | | | ||||| || || || || ||||| || | ||| | || ||||| || |
Sbjct 88510 AGCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAA 88569
Query 66251 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 66310
|| | | ||| ||||| ||||| || || || || ||||| |||| ||| || ||
Sbjct 88570 GACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCC 88629
Query 66311 ACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 66370
| | ||||| ||| | ||||| || || || ||||| || ||||| | ||
Sbjct 88630 AGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGC 88689
Query 66371 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430
||| || | ||||| ||||| || || ||||| |||||| |||||| | || ||
Sbjct 88690 GCAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAA 88749
Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490
|| |||| || | | || || ||||| || | ||||| || ||||||||
Sbjct 88750 GCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGT 88809
Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 66550
|| |||| | || | || ||||||||||||||| || || ||||| |
Sbjct 88810 GAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCA 88869
Query 66551 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 66610
|| || || || |||||||| | ||||||||| || | ||| |||| ||| | |
Sbjct 88870 GATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAG 88929
Query 66611 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 66670
|| | | ||| || ||||| || || || || || || | || ||||||||
Sbjct 88930 CTTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCG 88989
Query 66671 TTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
|| || | ||| | |||| ||| | |||||
Sbjct 88990 GTCATATACAATGGCAGAGTCGAGCTCGTCCTT 89022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658168892099000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |