Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 2e-23
>seq2
Length=950389
Score = 123 bits (136), Expect = 2e-23
Identities = 215/304 (71%), Gaps = 14/304 (5%)
Strand=Plus/Minus
Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168
|||||| ||||| | |||| | ||||||||| || || |||||| | | ||| ||||
Sbjct 623842 CACGTAGAACTG-CGCAAACATGTGACAAGGCGGCAGCGCCATCTTCTTCAAGTCGGCGG 623784
Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCAC 21226
|||||||||||| ||| | |||||| || |||| ||| || | | || | ||
Sbjct 623783 GGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTG--TGGAC 623726
Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286
|| | ||||||||| || ||||| ||| ||||| || | ||| | ||||||
Sbjct 623725 GACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCGACGTACTC 623666
Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGGCG 21343
|| || || || | |||||||||||||||||| || ||||| |||| |||||||| |
Sbjct 623665 GGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGGTG 623606
Query 21344 GTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTA 21402
| ||| ||||| ||| | | | || |||| || |||| ||||||| || || |
Sbjct 623605 G---CCG-AGCCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGA 623550
Query 21403 CGCC 21406
||||
Sbjct 623549 CGCC 623546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427773523578000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |