Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq88 98.7 7e-16
>seq88
Length=140259
Score = 98.7 bits (108), Expect = 7e-16
Identities = 289/445 (65%), Gaps = 8/445 (2%)
Strand=Plus/Minus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
||||| | ||||| || |||||||| || || | || || | || || ||||
Sbjct 57338 CGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATC 57279
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||||||||| || | ||||| || || | || ||||||||| ||||
Sbjct 57278 TTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATCTCT 57219
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
|||||||| ||||| ||| |||||| ||||| ||||||| || || | ||
Sbjct 57218 CGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCTG----AGGAA 57163
Query 22921 CCGTGTCAGGACGATGCACATC----AAATCATATCTGATGCCGTTGACATTGAGACGGC 22976
||| ||| | | || || | ||||| |||||||||| | |||||||| ||
Sbjct 57162 CCGCCCCAGCAAGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCGTCATTGAGAAGGA 57103
Query 22977 TTTCTTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACT 23036
||||| ||||| || || || || ||||| || |||| |
Sbjct 57102 GTTCTTGACCGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGATGAAGCA 57043
Query 23037 GTACATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAA 23096
|||||| |||| || || || || || || | ||||| || | | ||| | || ||
Sbjct 57042 GTACATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACGAGAAGGTCTACAA 56983
Query 23097 CGTTGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTT 23156
| |||| || || || |||||||| ||||| | ||| || || || ||||||||
Sbjct 56982 GTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTT 56923
Query 23157 TGAACGCCGTGTGAGTGAATATCAG 23181
|| ||||| |||| || |||
Sbjct 56922 CGAGAAGCGTGTCGGTGACTACCAG 56898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356231537741425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |