Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq14 205 1e-47 seq88 95.1 2e-14 >seq14 Length=442650 Score = 205 bits (226), Expect = 1e-47 Identities = 1195/1896 (63%), Gaps = 29/1896 (2%) Strand=Plus/Plus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | ||||| |||||||| || | || | | || || || |||||||| Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 || || || ||||| || |||| ||| ||| ||||| || || | ||| | Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 || || || ||||| || | ||| || || ||||||||||| || | ||| ||| Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945 | ||| | | |||||| | || | | |||||| | || || || | ||| ||| Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376 Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 || | || | | | | | ||||| || || ||| | || || || || | ||||| Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || | ||| ||| | |||| || | | || || || || || || || Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || || || |||| | || | || ||| || ||| ||| ||||| || | | Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 || || || |||| ||| || | || ||||| || ||||| || |||| ||| || || Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616 Query 79183 TTTCTAAGACCGTATGATC--TGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAG 79240 |||| | ||||| | || |||| || | || | || ||||| ||||||||||||| Sbjct 87617 TTTCGGATACCGT--GCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674 Query 79241 ACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAG-CGTATGATCCTGTG 79299 | || || ||| | |||||||| || || | | || || ||||| | Sbjct 87675 AAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTG-CGAGACGGGGGATCCCTCG 87733 Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 ||||| | || || || || | ||| | || ||| ||| || || ||| Sbjct 87734 TATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGG 87793 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 || ||||| ||||| |||| || || || | | || || || |||||||| | Sbjct 87794 TAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGC-AT 87852 Query 79420 TTTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478 |||| | || || || || | || || ||||||| ||| || || || |||| Sbjct 87853 GCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCG 87912 Query 79479 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 | | || | | || || | || || | || | ||| || || || || || Sbjct 87913 CATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAG 87972 Query 79539 ATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC-GTCCATCTA 79597 || | || | || | | || || | || | | || | | | || | | Sbjct 87973 GTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTC 88032 Query 79598 TTA--CAA-ACATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGC 79652 || ||| | ||| | || || | || ||||| || || || || ||||||| || Sbjct 88033 GTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGG 88092 Query 79653 ATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTG 79712 | | || | || || || ||||| ||||| | |||||||| | || | Sbjct 88093 AGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTT 88152 Query 79713 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAAT 79772 || || ||||| ||| || |||||||| || || ||||| || | || || || | Sbjct 88153 CTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGT 88212 Query 79773 CTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCTCT 79831 ||| | || | || || | ||| | | || ||||||| || | |||| | Sbjct 88213 CTGGGCCTCGAGGATGGCGTACCACA-GCTTCTGAGCCTTCATGGT---CTTGCGGCCGC 88268 Query 79832 T---TTCTCTTTCGTA-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTC 79886 |||||| ||||| || | ||| | | | ||||||||||| || | || | Sbjct 88269 GGCCTTCTCTCTCGTACTTCTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGC 88326 Query 79887 TAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTT 79946 | ||||| || |||| || ||||| | | ||| || || | | || || || || Sbjct 88327 AAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTT 88386 Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006 ||| ||||| ||||||||||| ||||| | || || || | || || |||||| || Sbjct 88387 CATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTT 88446 Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066 || |||||| | ||||||||| | | | ||||| ||||| || |||| ||| Sbjct 88447 ACCGTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTA 88506 Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 80126 || || | | | || || || || || || ||||| || | ||| | || ||||| || Sbjct 88507 GATAGCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTT 88566 Query 80127 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 80186 | || | | ||| ||||| ||||| || || || || ||||| |||| ||| || Sbjct 88567 GAAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGA 88626 Query 80187 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 ||| ||||||| ||| | ||||| || || || ||||| || ||||| | Sbjct 88627 GCCAGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCAT 88686 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 ||||| || | ||||| ||||| || || || || ||||| |||||| | || Sbjct 88687 GGCGCAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAG 88746 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 || || |||| || | | || || ||||| || | ||||| || ||||| Sbjct 88747 GAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTG 88806 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 80426 ||| || |||| | |||| || ||||||||||||||| || || ||||| | Sbjct 88807 CGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCC 88866 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 || || || || |||||||| | ||||||||| || | ||| |||| ||| || Sbjct 88867 CCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATC 88926 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 | || | | ||| || ||||| || || || || || || | || ||||| Sbjct 88927 GAGCTTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTC 88986 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 ||| || || | ||| | |||| ||| | ||||| Sbjct 88987 TCGGTCATATACAATGGCAGAGTCGAGCTCGTCCTT 89022 >seq88 Length=140259 Score = 95.1 bits (104), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || ||||| || ||||||||||||||| | | || || |||||||| Sbjct 57178 AACAGCAGGCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 57237 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| | || ||||| || ||||| || ||||| || || | || Sbjct 57238 AAGGTCAGACCAGGCATCAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCG 57297 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 |||||||| || || || || || |||||||| || | || | || | | || Sbjct 57298 CTGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGAGCGTAGGTAGACTCG 57357 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||| |||||||| | ||||| ||||||||||| Sbjct 57358 TGGTCCGTGATCCACTTCAGGGCCCAGTCGGCCTTCTT 57395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264535279000