Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq14 192 8e-44 >seq14 Length=442650 Score = 192 bits (212), Expect = 8e-44 Identities = 631/972 (65%), Gaps = 8/972 (1%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 |||| || ||||| || || || || ||||||| || | | || | || || || Sbjct 88055 GCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCG 88114 Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 ||||| || || | ||||||||| | || | || || ||||| ||| || Sbjct 88115 GTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 88174 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 |||||||| || || || || || | || || || |||| | || | || || | | Sbjct 88175 GCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTAC 88234 Query 71878 CAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTA-TTGT-GTA 71934 || | | || ||||||| || | || | | |||||| ||||| || | ||| Sbjct 88235 CACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTA 88293 Query 71935 TATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAAT-CCAGGACATTCATTCGGACA 71993 | | | ||||||||||| || | ||| | || ||||| || || || || || Sbjct 88294 CAGAGCC--TCGAACTCGTCACCGTA-GCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCA 88350 Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053 ||| | | ||| || || | | | || || ||||| ||||| ||||||||||| || Sbjct 88351 CATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAG 88410 Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113 ||| | || || || | || || |||||| || || |||||| | ||||| Sbjct 88411 AGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAG 88470 Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173 |||| | | | ||||| ||||| || |||| ||| || || | | | || || || || Sbjct 88471 GAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTT 88530 Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233 || || ||||| || | ||| | || ||||| || | || | | ||| ||||| || Sbjct 88531 ATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAT 88590 Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT 72293 ||| || || | || ||||| |||| ||| || ||| ||||||| ||| | | Sbjct 88591 ACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGAC 88650 Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 72353 ||||| || || || ||||| || ||||| | ||||| || | ||||| || Sbjct 88651 GTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTA 88710 Query 72354 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 72413 ||| || || ||||| |||||| |||||| | || || || |||| || | | Sbjct 88711 GATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTG 88770 Query 72414 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 72473 || || ||||| || | ||||| || |||||||| || |||| | |||| || Sbjct 88771 GGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAG 88830 Query 72474 ATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCAT 72533 ||||||||||||||| || || ||||| | || || || || |||||||| Sbjct 88831 GTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCAT 88890 Query 72534 TAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTC 72593 | ||| ||||| || | ||| |||| ||| || | || | | ||| || || Sbjct 88891 GATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTC 88950 Query 72594 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 72653 ||| || || || || || || | || |||||||| || || | ||| | || | Sbjct 88951 CAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTC 89010 Query 72654 GAGTTTATCCTT 72665 ||| | ||||| Sbjct 89011 GAGCTCGTCCTT 89022 Score = 89.7 bits (98), Expect = 7e-13 Identities = 350/545 (64%), Gaps = 9/545 (2%) Strand=Plus/Plus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || ||||||||||| | | || || | || || || ||||||||| Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCT 70907 || || || ||||| || |||| ||| || ||||| || || | ||| || | | Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCG-T 87255 Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967 || || ||||| || || | ||||| || ||||||||||| || | ||| || Sbjct 87256 GGGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGC 87315 Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 71027 || ||| | | |||||| | || | | |||||| | || || || | ||| || Sbjct 87316 AGACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGAT 87375 Query 71028 ATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTT 71084 ||| | || | | | | | ||||| || || ||| | || ||||| || | || || Sbjct 87376 ATCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTT 87435 Query 71085 GATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTAC 71144 || | ||| ||| | |||| || | | || || || || || || || Sbjct 87436 CATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGAC 87495 Query 71145 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGA 71204 || || || |||| | || | || ||| || ||| ||| || || || | | Sbjct 87496 CTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCA 87555 Query 71205 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACT 71264 ||| || || |||| ||| || | || ||||| || ||||| || |||| ||| | || Sbjct 87556 CTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCT 87615 Query 71265 ATTTCTAAGACCATGTGATC--GGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCC 71322 |||| | ||| ||| || ||| || | || | || ||||| | ||||||||| Sbjct 87616 GTTTCGGATACC--GTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCA 87673 Query 71323 GATGG 71327 || || Sbjct 87674 GAAGG 87678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135215111000