Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq14 192 8e-44
>seq14
Length=442650
Score = 192 bits (212), Expect = 8e-44
Identities = 631/972 (65%), Gaps = 8/972 (1%)
Strand=Plus/Plus
Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757
|||| || ||||| || || || || ||||||| || | | || | || || ||
Sbjct 88055 GCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCG 88114
Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817
||||| || || | ||||||||| | || | || || ||||| ||| ||
Sbjct 88115 GTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 88174
Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877
|||||||| || || || || || | || || || |||| | || | || || | |
Sbjct 88175 GCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTAC 88234
Query 71878 CAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTA-TTGT-GTA 71934
|| | | || ||||||| || | || | | |||||| ||||| || | |||
Sbjct 88235 CACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTA 88293
Query 71935 TATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAAT-CCAGGACATTCATTCGGACA 71993
| | | ||||||||||| || | ||| | || ||||| || || || || ||
Sbjct 88294 CAGAGCC--TCGAACTCGTCACCGTA-GCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCA 88350
Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053
||| | | ||| || || | | | || || ||||| ||||| ||||||||||| ||
Sbjct 88351 CATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAG 88410
Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113
||| | || || || | || || |||||| || || |||||| | |||||
Sbjct 88411 AGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAG 88470
Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173
|||| | | | ||||| ||||| || |||| ||| || || | | | || || || ||
Sbjct 88471 GAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTT 88530
Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233
|| || ||||| || | ||| | || ||||| || | || | | ||| ||||| ||
Sbjct 88531 ATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAT 88590
Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT 72293
||| || || | || ||||| |||| ||| || ||| ||||||| ||| | |
Sbjct 88591 ACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGAC 88650
Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 72353
||||| || || || ||||| || ||||| | ||||| || | ||||| ||
Sbjct 88651 GTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTA 88710
Query 72354 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 72413
||| || || ||||| |||||| |||||| | || || || |||| || | |
Sbjct 88711 GATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTG 88770
Query 72414 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 72473
|| || ||||| || | ||||| || |||||||| || |||| | |||| ||
Sbjct 88771 GGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAG 88830
Query 72474 ATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCAT 72533
||||||||||||||| || || ||||| | || || || || ||||||||
Sbjct 88831 GTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCAT 88890
Query 72534 TAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTC 72593
| ||| ||||| || | ||| |||| ||| || | || | | ||| || ||
Sbjct 88891 GATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTC 88950
Query 72594 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 72653
||| || || || || || || | || |||||||| || || | ||| | || |
Sbjct 88951 CAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTC 89010
Query 72654 GAGTTTATCCTT 72665
||| | |||||
Sbjct 89011 GAGCTCGTCCTT 89022
Score = 89.7 bits (98), Expect = 7e-13
Identities = 350/545 (64%), Gaps = 9/545 (2%)
Strand=Plus/Plus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || ||||||||||| | | || || | || || || |||||||||
Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCT 70907
|| || || ||||| || |||| ||| || ||||| || || | ||| || | |
Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCG-T 87255
Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967
|| || ||||| || || | ||||| || ||||||||||| || | ||| ||
Sbjct 87256 GGGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGC 87315
Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 71027
|| ||| | | |||||| | || | | |||||| | || || || | ||| ||
Sbjct 87316 AGACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGAT 87375
Query 71028 ATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTT 71084
||| | || | | | | | ||||| || || ||| | || ||||| || | || ||
Sbjct 87376 ATCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTT 87435
Query 71085 GATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTAC 71144
|| | ||| ||| | |||| || | | || || || || || || ||
Sbjct 87436 CATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGAC 87495
Query 71145 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGA 71204
|| || || |||| | || | || ||| || ||| ||| || || || | |
Sbjct 87496 CTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCA 87555
Query 71205 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACT 71264
||| || || |||| ||| || | || ||||| || ||||| || |||| ||| | ||
Sbjct 87556 CTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCT 87615
Query 71265 ATTTCTAAGACCATGTGATC--GGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCC 71322
|||| | ||| ||| || ||| || | || | || ||||| | |||||||||
Sbjct 87616 GTTTCGGATACC--GTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCA 87673
Query 71323 GATGG 71327
|| ||
Sbjct 87674 GAAGG 87678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671135215111000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |