Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 5e-11 >seq4 Length=784365 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 |||||| |||| |||||||| || || |||||||| ||||||| | | || || Sbjct 46727 CACCAAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAGCGTCCGGCCATCTTC 46786 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 ||| ||||||||| || || | ||| |||||||| | || || || || || || Sbjct 46787 CAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTG 46846 Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339 ||| || || | | ||| ||||| || | || || || ||||||||||| Sbjct 46847 GATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGACTCCACCTCTAGTGTTATCGTTTT 46906 Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||||| | || || ||||| || ||||| Sbjct 46907 TCCCGTCAATGTCTTGACGAAGATCTGCAT 46936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318775754576550