Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq117 127 2e-24
>seq117
Length=95901
Score = 127 bits (140), Expect = 2e-24
Identities = 185/254 (73%), Gaps = 8/254 (3%)
Strand=Plus/Plus
Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563
|||||||| ||||| ||||| ||||| | | | || ||||| || ||||| |
Sbjct 31032 CCCGTGGAGCCGAAGCCGCCGGCGCCGCGCACGCTCTCCTCCAGCTCCGTGACCTCCATC 31091
Query 5564 ACATCGGGGAACGCAGC-GCGCTCGCAGATC-AGCTGCGCTATTCGGTCGCCCGTCTTTA 5621
|| |||||| | || ||||||| ||| | ||||| || | ||||||||| |
Sbjct 31092 ACCTCGGGGGT-GTAGATGCGCTCG-AGAACGAGCTGGGCGACGCGGTCGCCCTCGGCCA 31149
Query 5622 CCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTC 5679
||| ||| ||| || |||| |||||||| | || || | ||| ||||||||
Sbjct 31150 CCTGGAAGTCGGCGT--CCGAGTGGTTGAACAAGAGGACCTTGACCTGGCCACGGTAGTC 31207
Query 5680 GGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGG 5739
|||||| || |||||||||||| |||||||||||||||| | || ||||||||||||||
Sbjct 31208 GGCGTCGATGACGCCCGCGCCCGTGTCGATGAAGTGCTTGGCTGCTAGGCCGGAGCGGGG 31267
Query 5740 AGCCACGCGGCCGT 5753
|| | ||||||||
Sbjct 31268 GGCGATGCGGCCGT 31281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430051910388200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |