Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq328 107 3e-19
seq54 104 4e-18
>seq328
Length=1520
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 137 GCCAAGCGTCACAGGAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 195
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||| || ||||||||||| ||||||||| ||||||
Sbjct 196 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCTG 236
>seq54
Length=201958
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 134555 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTAT 134497
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| | ||||
Sbjct 134496 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 134456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074765704175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |