Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq14 192 7e-44
seq88 95.1 2e-14
>seq14
Length=442650
Score = 192 bits (212), Expect = 7e-44
Identities = 630/972 (65%), Gaps = 8/972 (1%)
Strand=Plus/Plus
Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951
|||| || ||||| || || || || ||||||| || | | || | || |||||
Sbjct 88055 GCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCG 88114
Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011
||||| || || | ||| ||||| | || | || || ||||| ||| ||
Sbjct 88115 GTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 88174
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
|||||||| || || ||||| || | || || || |||| | || | || || | |
Sbjct 88175 GCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTAC 88234
Query 63072 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTA 63128
|| | | || ||||||| || | | | | |||||| ||||| | |||
Sbjct 88235 CACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTA 88293
Query 63129 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACA 63187
| | | ||||||||||| || | || | ||| ||||| || || | || ||
Sbjct 88294 CAGAGCC--TCGAACTCGTCACCGTAG-CAGTCAGCAAGGCCAGGGCACTCGTTGGGGCA 88350
Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247
||| | | ||| || |||| | || || || ||||| ||||| ||||||||||| ||
Sbjct 88351 CATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAG 88410
Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307
||| | || || || | || || ||||| || || |||||| | |||||
Sbjct 88411 AGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAG 88470
Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367
|||| | | | ||||| ||||| || |||| ||| || || | | | ||||| || ||
Sbjct 88471 GAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTT 88530
Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427
|| || ||||| || | ||| | || ||||| || | || | | ||| ||||| ||
Sbjct 88531 ATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAT 88590
Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63487
||||||||| | || |||||||||| ||| || ||| ||||||| ||| |
Sbjct 88591 ACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGAC 88650
Query 63488 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63547
||||| || || || ||||| || ||||| | ||||| || | || || ||
Sbjct 88651 GTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTA 88710
Query 63548 GATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63607
|||||| || || || ||||| |||||| | || || || |||| || | |
Sbjct 88711 GATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTG 88770
Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63667
|| || ||||| || | ||||| || |||||||| || |||| | || | ||
Sbjct 88771 GGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAG 88830
Query 63668 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63727
||||||||||||||| || || ||||| | || || || || ||||||||
Sbjct 88831 GTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCAT 88890
Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787
| ||||||||| || | ||| |||| ||| | | || | | ||| || ||
Sbjct 88891 GATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTC 88950
Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847
||| || || || || || || | || |||||||| || || | ||| | ||||
Sbjct 88951 CAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTC 89010
Query 63848 GAGTTTATCCTT 63859
||| | |||||
Sbjct 89011 GAGCTCGTCCTT 89022
Score = 91.5 bits (100), Expect = 2e-13
Identities = 348/544 (64%), Gaps = 7/544 (1%)
Strand=Plus/Plus
Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042
|||| ||| | ||||| |||||||| || | || | | || || || ||||||||
Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196
Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102
|| || || ||||| || |||| ||| || ||||| || || | ||| |
Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256
Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162
|| || || ||||| || | ||| || || ||||||||||| || | ||| |||
Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316
Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222
| ||| | | |||||| | || | | |||||| | || || || | ||| |||
Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376
Query 62223 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279
|| | || | | | | | ||||| || || ||| | || || || || | |||||
Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436
Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62339
|| | ||| ||| | |||| || | | || || || || || || ||
Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496
Query 62340 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62399
|| || || |||| | || | || ||| || ||| ||| || || || | ||
Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556
Query 62400 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62459
|| || || |||| ||| || | || ||||| || ||||| || |||| ||| || ||
Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616
Query 62460 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62517
|||| | |||| || || |||| || | || | || ||||| | ||||||||| |
Sbjct 87617 TTTCGGATACCG--TGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674
Query 62518 ACGG 62521
| ||
Sbjct 87675 AAGG 87678
>seq88
Length=140259
Score = 95.1 bits (104), Expect = 2e-14
Identities = 152/218 (70%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| || || ||||| || ||||||||||||||| | | || || ||||||||
Sbjct 57178 AACAGCAGGCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 57237
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| || || || ||||| | || ||||| || ||||| || ||||| ||||| | ||
Sbjct 57238 AAGGTCAGACCAGGCATCAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCG 57297
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33471
|||||||| || || || ||||| ||||||| || | || | || | ||
Sbjct 57298 CTGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGAGCGTAGGTAGACTCG 57357
Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509
||| |||||||| | ||||| |||||||||||
Sbjct 57358 TGGTCCGTGATCCACTTCAGGGCCCAGTCGGCCTTCTT 57395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622943501251000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |