Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq14 192 7e-44 seq88 95.1 2e-14 >seq14 Length=442650 Score = 192 bits (212), Expect = 7e-44 Identities = 630/972 (65%), Gaps = 8/972 (1%) Strand=Plus/Plus Query 62892 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62951 |||| || ||||| || || || || ||||||| || | | || | || ||||| Sbjct 88055 GCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCG 88114 Query 62952 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63011 ||||| || || | ||| ||||| | || | || || ||||| ||| || Sbjct 88115 GTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 88174 Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 |||||||| || || ||||| || | || || || |||| | || | || || | | Sbjct 88175 GCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTAC 88234 Query 63072 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTA--TAGTGTA 63128 || | | || ||||||| || | | | | |||||| ||||| | ||| Sbjct 88235 CACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTA 88293 Query 63129 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACA 63187 | | | ||||||||||| || | || | ||| ||||| || || | || || Sbjct 88294 CAGAGCC--TCGAACTCGTCACCGTAG-CAGTCAGCAAGGCCAGGGCACTCGTTGGGGCA 88350 Query 63188 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63247 ||| | | ||| || |||| | || || || ||||| ||||| ||||||||||| || Sbjct 88351 CATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAG 88410 Query 63248 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63307 ||| | || || || | || || ||||| || || |||||| | ||||| Sbjct 88411 AGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAG 88470 Query 63308 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63367 |||| | | | ||||| ||||| || |||| ||| || || | | | ||||| || || Sbjct 88471 GAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTT 88530 Query 63368 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63427 || || ||||| || | ||| | || ||||| || | || | | ||| ||||| || Sbjct 88531 ATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGAT 88590 Query 63428 ACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 63487 ||||||||| | || |||||||||| ||| || ||| ||||||| ||| | Sbjct 88591 ACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGAC 88650 Query 63488 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63547 ||||| || || || ||||| || ||||| | ||||| || | || || || Sbjct 88651 GTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTA 88710 Query 63548 GATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63607 |||||| || || || ||||| |||||| | || || || |||| || | | Sbjct 88711 GATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTG 88770 Query 63608 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63667 || || ||||| || | ||||| || |||||||| || |||| | || | || Sbjct 88771 GGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAG 88830 Query 63668 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63727 ||||||||||||||| || || ||||| | || || || || |||||||| Sbjct 88831 GTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCAT 88890 Query 63728 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63787 | ||||||||| || | ||| |||| ||| | | || | | ||| || || Sbjct 88891 GATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTC 88950 Query 63788 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847 ||| || || || || || || | || |||||||| || || | ||| | |||| Sbjct 88951 CAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTC 89010 Query 63848 GAGTTTATCCTT 63859 ||| | ||||| Sbjct 89011 GAGCTCGTCCTT 89022 Score = 91.5 bits (100), Expect = 2e-13 Identities = 348/544 (64%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||| | ||||| |||||||| || | || | | || || || |||||||| Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102 || || || ||||| || |||| ||| || ||||| || || | ||| | Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256 Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162 || || || ||||| || | ||| || || ||||||||||| || | ||| ||| Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316 Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222 | ||| | | |||||| | || | | |||||| | || || || | ||| ||| Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376 Query 62223 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279 || | || | | | | | ||||| || || ||| | || || || || | ||||| Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436 Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62339 || | ||| ||| | |||| || | | || || || || || || || Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496 Query 62340 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62399 || || || |||| | || | || ||| || ||| ||| || || || | || Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556 Query 62400 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62459 || || || |||| ||| || | || ||||| || ||||| || |||| ||| || || Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616 Query 62460 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62517 |||| | |||| || || |||| || | || | || ||||| | ||||||||| | Sbjct 87617 TTTCGGATACCG--TGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674 Query 62518 ACGG 62521 | || Sbjct 87675 AAGG 87678 >seq88 Length=140259 Score = 95.1 bits (104), Expect = 2e-14 Identities = 152/218 (70%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| || ||||||||||||||| | | || || |||||||| Sbjct 57178 AACAGCAGGCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 57237 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || || ||||| | || ||||| || ||||| || ||||| ||||| | || Sbjct 57238 AAGGTCAGACCAGGCATCAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCG 57297 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33471 |||||||| || || || ||||| ||||||| || | || | || | || Sbjct 57298 CTGAAGAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGAGCGTAGGTAGACTCG 57357 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 ||| |||||||| | ||||| ||||||||||| Sbjct 57358 TGGTCCGTGATCCACTTCAGGGCCCAGTCGGCCTTCTT 57395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943501251000