Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq88 89.7 5e-13
>seq88
Length=140259
Score = 89.7 bits (98), Expect = 5e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || || ||||| || || || || || |||||||| |||| || ||||| |
Sbjct 56898 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 56957
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | || ||| | ||| |||| ||| | ||| | ||
Sbjct 56958 CATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTGCCAAGGGCGACAAGGAG 57017
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT--GGATTGCGAATTCATGCCCAACATA 119819
|| || ||||| ||||||||||| | ||| || | ||| |||||||| | || |
Sbjct 57018 ACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCG--TTCATGCCGAGCAGA 57075
Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
| || | ||| | ||| ||||| ||||| |||||| |||| || ||
Sbjct 57076 CTGCAGGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATC 57125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478659557942000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |