Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq88 89.7 5e-13 >seq88 Length=140259 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| |||| || ||||| | Sbjct 56898 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 56957 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | || ||| | ||| |||| ||| | ||| | || Sbjct 56958 CATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTGCCAAGGGCGACAAGGAG 57017 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT--GGATTGCGAATTCATGCCCAACATA 119819 || || ||||| ||||||||||| | ||| || | ||| |||||||| | || | Sbjct 57018 ACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCG--TTCATGCCGAGCAGA 57075 Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 | || | ||| | ||| ||||| ||||| |||||| |||| || || Sbjct 57076 CTGCAGGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATC 57125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659557942000