Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 356 6e-93 >seq14 Length=442650 Score = 356 bits (394), Expect = 6e-93 Identities = 1133/1736 (65%), Gaps = 42/1736 (2%) Strand=Plus/Minus Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504 || ||||| || ||||| ||| | |||||||||||| |||||||| | ||| || Sbjct 88914 GTCGAACGGCCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATT 88855 Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGC 363562 || | ||||| || || || || | || || | | ||||||||||| ||| Sbjct 88854 GAGAGAGTTATTGAGACGTACAACCTGAT--GTCGCACAAATTCTTCACGCACGCATCGC 88797 Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622 | ||| ||| ||||||||| || | | || ||| |||| || ||||| || | | | Sbjct 88796 CTACACTGTTCAATGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGACA 88737 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 ||||||| || || || ||||||| || || || |||| ||| || | || |||| Sbjct 88736 TGAAGGATGACAGTATTGAAGGTATCTACGATACTCTCAAGACTTGCGCCATGATCTCCA 88677 Query 363683 AGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 ||| || || || |||||| | | || ||||| | | ||||| || | | |||||| Sbjct 88676 AGATGGCCGGAGGTATTGGTCTGAACG-TCCACCGTATCCGTGCCACTGG-CTCTTACAT 88619 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || || || || || | |||||||||||||||| || |||| || Sbjct 88618 CGCCGGTACCAACGGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAACAC 88559 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 ||| | ||||| ||||||||||| ||||| || || || ||||| || || || Sbjct 88558 TGCCCGTTACGTTGACCAGGGTGGTAATAAGCGTCCTGGTGCTTTCGCTATCTACCTGGA 88499 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGA 363920 ||| || || ||| | || ||||| || || | || || ||| || || ||||| Sbjct 88498 GCCATGGCACGCTGATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAGGA 88439 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 | || || || || || ||| ||| || ||| || |||||| || |||||||| || Sbjct 88438 GGTCCGAGCCCGCGACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGGGT 88379 Query 363981 GGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 ||| | | | | | ||| | ||| | ||||| |||| || || || ||| | || Sbjct 88378 TGAG--AAGAACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGAC 88321 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGA-ATCGGAGGGAAAGGCTCG 364097 | |||||||| | | ||||| ||||| ||||| || | | ||| ||| || Sbjct 88320 TGCTACGGTGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCCGCGGC-CG 88262 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||||| || || |||||||| |||| |||||| | || | |||| ||||| || Sbjct 88261 CAAGACCATGAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGG 88202 Query 364158 AACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 | ||||| | ||| | ||||| ||| | |||||||||||| ||||||| || |||| | Sbjct 88201 CA-ACCCTTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 88143 Query 364217 GTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 | || | || |||| |||||| || |||||||| || || ||| ||||| || ||| Sbjct 88142 GAACCA-TCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAG 88084 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGA-- 364325 || || || ||||| || || || || || || || | ||| |||| | Sbjct 88083 GTGGCTGTCTGCAACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAAC 88024 Query 364326 TGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGA 364385 || ||| || |||||| || | || || ||| | | | | |||| || | Sbjct 88023 TGCTAC----AACTTCCAGCACCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACCTGAA 87968 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC-----TAATATG 364440 |||| | || || || | || || | ||||| | || | | || ||| Sbjct 87967 CAAGATCATTGATGTCAACCACTACCC----CGTGAAGGAG-GCATACAACAGCAACATG 87913 Query 364441 CGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG 364500 || || | || |||||| ||||||| ||||| || || || | || || ||| Sbjct 87912 CGACACAGGCCCATTGGTGTTGGTGTCCAGGGTCTTGCCGATGCCTTCTTGGCTCTCCGC 87853 Query 364501 ATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTAT 364560 ||| ||||||| || ||||| ||||| || || || ||||||| || || || || Sbjct 87852 ATGCCATTTGAGTCCCCTGAGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTAC 87793 Query 364561 TTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTAT 364620 || || ||||||| || || || | || || | || ||| || || Sbjct 87792 CACGCTGCTTTGACTGCGTCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATAC 87733 Query 364621 GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCT 364680 ||||| ||||| | ||||||||| | | || | ||| | ||| ||| ||| ||| Sbjct 87732 GAGGGATCCCCCGTCTCGCAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCT 87673 Query 364681 GTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC 364740 | | ||| |||||||| | | | || | ||| |||| |||| || ||| | Sbjct 87672 GATCTTTGGGACTGGGATGCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGC 87613 Query 364741 CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGC 364800 | | | ||||||||||| || || || || | ||||| || || |||||||||||| Sbjct 87612 TTGTTGATGGCGCCCATGCCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGC 87553 Query 364801 TTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTA 364860 ||||| || | || || | || || || || ||| | || || || | ||| Sbjct 87552 TTCGAGCCATACACCTCTAACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTC 87493 Query 364861 GTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAG 364920 || || | ||| ||| ||| || | || || |||||| ||| |||||| Sbjct 87492 GTCAACCCCTGGCTACTCAGGGACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAG 87433 Query 364921 AACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTG 364980 ||| |||||| |||| |||||||| | |||||||| || | | || | ||| | Sbjct 87432 AACCGTATCATTGCCGAAGATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATC 87373 Query 364981 AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCC 365040 ||| || | ||||| ||||| |||||| | || | | || | | | ||| | || Sbjct 87372 AAGGCTTTGTACAAGACCGTCTGGGAAGTCTCTCAGAGGACGATTGTGCAGATGTCTGCT 87313 Query 365041 GATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACC 365100 || |||||||| || ||| ||| ||||| | ||| | |||| | |||| || Sbjct 87312 GACCGCGGTGCCTTCATCGACCAGTCGCAGTCTCTCAACATCCACATGCGTGAGCCCACG 87253 Query 365101 TCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || |||||| ||| ||| ||||| ||||| ||||| || Sbjct 87252 ATGGGCAAGATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAGACTGG 87197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345667871450