Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq14 194 2e-44 seq4 127 2e-24 seq88 118 1e-21 seq80 107 2e-18 seq5 105 6e-18 >seq14 Length=442650 Score = 194 bits (214), Expect = 2e-44 Identities = 925/1444 (64%), Gaps = 27/1444 (2%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | |||||| ||| || | |||||| ||| | || Sbjct 87488 TTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGC 87547 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| |||||||| || || | || | |||||| |||||| ||||| | Sbjct 87548 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATC 87607 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || || || || | ||||||| |||||| | | |||| | | | |||| ||||| Sbjct 87608 AACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAA 87667 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATG-CCCT-CGCTGGCGGGGC 145295 || || ||| ||| |||||||||| || || || || |||| || |||| Sbjct 87668 AGATCAGAAGGCTGGACGCCCCACATGTCATATTG-AAGCTGTCCCTGCGAGACGGGGGA 87726 Query 145296 TGCCTTGAAAGGAACT-GTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGA 145354 | ||| | | | || ||| ||| | ||||||| |||||| ||| || | Sbjct 87727 TCCCTCGTATG--TCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAA 87784 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 || || || || |||||| || || |||| ||| | || ||| | ||| Sbjct 87785 GCAGCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCA 87844 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | |||||||| || | || |||||||| || ||||| | || || || |||||| Sbjct 87845 AATGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGC 87904 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534 | ||| ||||||||| | ||| || | || || | || || || || Sbjct 87905 CTGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATC 87964 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||| ||| || || || |||| || | | | | | | |||| | | Sbjct 87965 TTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAG 88024 Query 145595 GCCTCGTCAACGACCACACA-GCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653 | || | | ||| | ||| | || || || |||| || || || ||| Sbjct 88025 TTGTTTTCGTAGTCAACATATGCT-GGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCAC 88083 Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713 ||| || | | | ||| | | |||||||| ||||| ||| | ||||||||| Sbjct 88084 CTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCC 88143 Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773 ||| || | ||| || || || | |||||| || ||||||||||||||| | || ||| Sbjct 88144 CAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCC 88203 Query 145774 AGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCTGC 145831 ||||| ||| | ||| | ||| || || || | ||| || || || Sbjct 88204 GGTCTCGGTCTGGGCCTCGAGGAT--GGCGTACCACAGCTTCTGAGCCTTCATGGTCTTG 88261 Query 145832 TGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAA 145891 || |||||| ||| ||||| ||| ||| || |||| ||| || ||||||||| Sbjct 88262 CGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAG 88321 Query 145892 TCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACG 145951 || | ||||| || |||| |||||| ||||| || | ||| ||||||| | || Sbjct 88322 TCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACC 88381 Query 145952 CGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCC 146011 |||| ||| || | || || | ||| || || | | |||||| ||| | ||| Sbjct 88382 CGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCC 88441 Query 146012 TCAGCACCCATGTTTCGCT-TCAAATTAAGCACACT-ATAGATGTCCGCGTGCCACGGTT 146069 || | || || ||| | ||| | || | ||| ||| || |||||||| || | Sbjct 88442 TCCTTA-CCGTGGTTCTTTCGCAAGTCGAGGA-ACTCGAAGACATCAGCGTGCCATGGCT 88499 Query 146070 CAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTACCA 146126 | | |||| |||| || || || || ||||||||||| |||| ||| | Sbjct 88500 CCAGGTAGATAGCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAG 88559 Query 146127 TGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTTTA 146186 ||||||| ||||| || | |||||| || ||| | | |||||| ||| | | Sbjct 88560 TGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGA 88619 Query 146187 TTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTACTTGG 146246 | | ||| || || | | || || |||| || | ||| ||| | ||||| Sbjct 88620 TGTAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGG 88679 Query 146247 ATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAA 146303 | || ||||| |||| ||| || |||||||| || ||||| || || |||| | Sbjct 88680 AGATCATGGCGCAAGTC-TTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTC--A 88736 Query 146304 TGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCG 146363 || ||| || |||||||| ||| ||| | | ||||| || || ||||| || | Sbjct 88737 TGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAG 88796 Query 146364 GGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCT-TGA 146422 | |||||||| || | ||| | ||||| ||||| || ||| | ||| | | Sbjct 88797 GCGATGCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAAC-TCTCTCA 88855 Query 146423 ATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCC 146482 || || || || || || | ||| || ||||||| |||||| || ||||| || | Sbjct 88856 ATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACG 88915 Query 146483 ACTT 146486 |||| Sbjct 88916 ACTT 88919 >seq4 Length=784365 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| |||||||| || |||||||| ||| Sbjct 47166 CCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 47225 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || || |||| | ||||||||||| |||||| Sbjct 47226 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCAGGAGGG 47285 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| || || ||||| | || | ||| |||| ||||| | Sbjct 47286 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 47345 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| || || || ||||| ||||||||| Sbjct 47346 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 47393 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | || |||||||| ||||||||||| ||| | Sbjct 46938 CCACCACGAAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 46997 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || || |||| | ||||||||||| || ||| Sbjct 46998 AGAGTACGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCGGGGGGG 47057 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | ||| |||| |||||||| Sbjct 47058 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAGGACTCGACC 47117 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || || || ||||| Sbjct 47118 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 47164 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | |||||||||||| || || ||||| || | Sbjct 46710 CCACCACGCAGACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCAGAC 46769 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | |||||| || ||| |||| | |||||||||||| || ||| Sbjct 46770 AGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 46829 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | || | || || | |||||| | Sbjct 46830 ATTCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGACTCCACC 46889 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| || || | || || ||||| |||||||| Sbjct 46890 TCTAGTGTTATCGTTTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 46936 >seq88 Length=140259 Score = 118 bits (130), Expect = 1e-21 Identities = 343/515 (67%), Gaps = 15/515 (3%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG--CGA 46144 || ||| | || ||||| |||||||||| |||||||||||| | | ||| | | Sbjct 57407 CCCTGCATCCGTAAGAAGGCCGACTGGGCCCTGAAGTGGATCAC--GGACCACGAGTCTA 57350 Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTT 46204 | | ||| ||||| |||| ||||| || ||| ||||| |||| || || || Sbjct 57349 CCTACGCTCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTT 57290 Query 46205 TTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 | ||| ||||||| | | || | || | ||||| || ||||| || ||||| Sbjct 57289 TCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACG 57230 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTC 46324 ||||||| || || |||||||| ||||| || ||||| || || || || | | ||| Sbjct 57229 AGCTGATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCTTG--CCTGCTGT-TCTCTC 57173 Query 46325 GCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGC 46382 | || | || || || | | |||| ||| || ||| || || || | Sbjct 57172 ACCTG-AGGAACCGCCCCAGCAAGGC-GCGTGTCGAGAAGATCATCACTGATGCCGTCGT 57115 Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCC-GCTGCCCTGCTGGGCATGAACGCAC 46441 ||||||||||||||| || || | || || ||| || | ||||| ||||||||||| Sbjct 57114 CATTGAGAAGGAGTTCTTGACCGAGGCTCTTCCCTGCAG-TCTGCTCGGCATGAACGCCA 57056 Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC 46501 | ||| | ||||||||||| || || ||||| || || || ||| | | Sbjct 57055 ACCTGATGAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACG 56996 Query 46502 CGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560 |||| | | || | | ||| || || || || ||| | ||||||||||| | ||| Sbjct 56995 AGAAG-GTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGC 56937 Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || || ||||| ||||| ||||| || || Sbjct 56936 AAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 56902 >seq80 Length=149332 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||| ||| | || | ||| |||||| || |||||||| ||| Sbjct 52911 CCACCACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 52852 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 52851 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 52792 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | |||||| | Sbjct 52791 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 52732 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | ||| || || || || || || ||||| |||||||||| Sbjct 52731 TCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATGA 52683 >seq5 Length=773751 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 717621 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 717562 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 717561 TCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 717502 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| |||||||| || | ||| | ||| || || || || || || |||| Sbjct 717501 CGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 717442 Query 131225 A 131225 | Sbjct 717441 A 717441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009997424000