Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq14 185 1e-41
>seq14
Length=442650
Score = 185 bits (204), Expect = 1e-41
Identities = 1182/1892 (62%), Gaps = 21/1892 (1%)
Strand=Plus/Plus
Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897
|||| ||| | ||||| |||||||| || | || | | || || || ||||||||
Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196
Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957
|| || || ||||| || |||| ||| || ||||| || || | ||| |
Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256
Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017
|| || || ||||| || | ||| || || ||||||||||| || | ||| |||
Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316
Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62077
| ||| | | ||||||| | || | | |||||| | || || || | ||| |||
Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376
Query 62078 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62134
|| | || | | | | | ||||| || || ||| | || || || || | |||||
Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436
Query 62135 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62194
|| | ||| ||| | |||| || | | || || || || || || ||
Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496
Query 62195 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 62254
|| || || |||| | || | || ||| || ||| ||| || || || | ||
Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556
Query 62255 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62314
|| || || |||| ||| || | || ||||| || ||||| || |||| ||| || ||
Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616
Query 62315 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62372
|||| | ||||| | || |||| || | || | || ||||| | ||||||||| |
Sbjct 87617 TTTCGGATACCGT--GCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674
Query 62373 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 62432
| || || ||| || || | | || ||||| | |
Sbjct 87675 AAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGT 87734
Query 62433 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62492
|||| | |||||| || || || || | || ||| ||| || ||| ||| |
Sbjct 87735 ATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGT 87794
Query 62493 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT 62552
| ||||| |||||||||| || || || | | || || || |||||||| |
Sbjct 87795 AGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGC-ATG 87853
Query 62553 TTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611
|||| | || || || || | || || ||||||| ||| || || || |||| |
Sbjct 87854 CGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGC 87913
Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671
| || | | | || || | || || | || | ||| || || || || ||
Sbjct 87914 ATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGG 87973
Query 62672 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCCCATCTAT 62730
|| | |||| || | | || || | || | | || | | | | | |
Sbjct 87974 TTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCG 88033
Query 62731 TA--CAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62785
|| ||| | ||| | || |||| || ||||| || || || || ||||||| || |
Sbjct 88034 TAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGA 88093
Query 62786 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 62845
| || | || ||||| ||||| || || | ||||||||| | || |
Sbjct 88094 GCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTC 88153
Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905
|| || ||||| ||| || |||||||| || || ||||| || | || || || ||
Sbjct 88154 TGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTC 88213
Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT 62964
|| | || | || || | ||| | | || ||||||| || | | |
Sbjct 88214 TGGGCCTCGAGGATGGCGTACCACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCC 88272
Query 62965 TTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT 63022
|||||| ||||| | ||| | | | ||||||||||| || | | | ||
Sbjct 88273 TTCTCTCTCGTACTTCTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCAAGG 88330
Query 63023 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63082
||||| || || | || ||||| | | ||| || |||| | || || || |||||
Sbjct 88331 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 88390
Query 63083 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63142
||||| ||||||||||| ||||| | || || || | || || ||||| || ||
Sbjct 88391 AAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCG 88450
Query 63143 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63202
|||||| | ||||||||| | | | ||||| ||||| || |||| ||| ||
Sbjct 88451 TGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 88510
Query 63203 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63262
|| | | | ||||| || || || || ||||| || | ||| | || ||||| || |
Sbjct 88511 GCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAG 88570
Query 63263 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCA 63322
|| | | ||| ||||| ||||| || || || || ||||| || | ||| || |||
Sbjct 88571 ACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCA 88630
Query 63323 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382
||||||| ||| | ||||| || || || ||||| || ||||| | |||
Sbjct 88631 GTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCG 88690
Query 63383 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 63442
|| || | ||||| ||||| || || ||||| |||||| |||||| | || ||
Sbjct 88691 CAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAG 88750
Query 63443 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTA 63502
|| |||| || | | || || ||||| || | ||||| || ||||| ||
Sbjct 88751 CACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTG 88810
Query 63503 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63562
|| |||| | || | || ||||||||||||||| || || ||||| |
Sbjct 88811 AAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAG 88870
Query 63563 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63622
|| || || || |||||||| | ||||||||| || | ||| |||| ||| | |
Sbjct 88871 ATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGC 88930
Query 63623 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63682
|| | | ||| || ||||| || || || || || || | || ||||||||
Sbjct 88931 TTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGG 88990
Query 63683 TCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714
|| || | ||| | |||| ||| | |||||
Sbjct 88991 TCATATACAATGGCAGAGTCGAGCTCGTCCTT 89022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633628237810000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |