Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq14 185 1e-41 >seq14 Length=442650 Score = 185 bits (204), Expect = 1e-41 Identities = 1182/1892 (62%), Gaps = 21/1892 (1%) Strand=Plus/Plus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | ||||| |||||||| || | || | | || || || |||||||| Sbjct 87137 TCCTGGTCGACGGTGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATG 87196 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957 || || || ||||| || |||| ||| || ||||| || || | ||| | Sbjct 87197 CCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTG 87256 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 || || || ||||| || | ||| || || ||||||||||| || | ||| ||| Sbjct 87257 GGCTCACGCATGTGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCA 87316 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62077 | ||| | | ||||||| | || | | |||||| | || || || | ||| ||| Sbjct 87317 GACATCTGCACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATA 87376 Query 62078 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62134 || | || | | | | | ||||| || || ||| | || || || || | ||||| Sbjct 87377 TCGGCCGGGATGCTGGGGATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTTC 87436 Query 62135 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62194 || | ||| ||| | |||| || | | || || || || || || || Sbjct 87437 ATAGCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACC 87496 Query 62195 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 62254 || || || |||| | || | || ||| || ||| ||| || || || | || Sbjct 87497 TGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCAC 87556 Query 62255 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 62314 || || || |||| ||| || | || ||||| || ||||| || |||| ||| || || Sbjct 87557 TCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTG 87616 Query 62315 TTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62372 |||| | ||||| | || |||| || | || | || ||||| | ||||||||| | Sbjct 87617 TTTCGGATACCGT--GCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAG 87674 Query 62373 ACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACAT 62432 | || || ||| || || | | || ||||| | | Sbjct 87675 AAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGT 87734 Query 62433 ATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAAT 62492 |||| | |||||| || || || || | || ||| ||| || ||| ||| | Sbjct 87735 ATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGT 87794 Query 62493 AAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAAT 62552 | ||||| |||||||||| || || || | | || || || |||||||| | Sbjct 87795 AGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGC-ATG 87853 Query 62553 TTAAGAGAATA-AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 |||| | || || || || | || || ||||||| ||| || || || |||| | Sbjct 87854 CGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGC 87913 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 | || | | | || || | || || | || | ||| || || || || || Sbjct 87914 ATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGG 87973 Query 62672 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-GCCCATCTAT 62730 || | |||| || | | || || | || | | || | | | | | | Sbjct 87974 TTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCG 88033 Query 62731 TA--CAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 62785 || ||| | ||| | || |||| || ||||| || || || || ||||||| || | Sbjct 88034 TAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGA 88093 Query 62786 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 62845 | || | || ||||| ||||| || || | ||||||||| | || | Sbjct 88094 GCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTC 88153 Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 || || ||||| ||| || |||||||| || || ||||| || | || || || || Sbjct 88154 TGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTC 88213 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT 62964 || | || | || || | ||| | | || ||||||| || | | | Sbjct 88214 TGGGCCTCGAGGATGGCGTACCACA-GCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCC 88272 Query 62965 TTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT 63022 |||||| ||||| | ||| | | | ||||||||||| || | | | || Sbjct 88273 TTCTCTCTCGTACTTCTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCAGCAAGG 88330 Query 63023 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63082 ||||| || || | || ||||| | | ||| || |||| | || || || ||||| Sbjct 88331 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 88390 Query 63083 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63142 ||||| ||||||||||| ||||| | || || || | || || ||||| || || Sbjct 88391 AAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCG 88450 Query 63143 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63202 |||||| | ||||||||| | | | ||||| ||||| || |||| ||| || Sbjct 88451 TGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 88510 Query 63203 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63262 || | | | ||||| || || || || ||||| || | ||| | || ||||| || | Sbjct 88511 GCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAG 88570 Query 63263 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCA 63322 || | | ||| ||||| ||||| || || || || ||||| || | ||| || ||| Sbjct 88571 ACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCA 88630 Query 63323 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382 ||||||| ||| | ||||| || || || ||||| || ||||| | ||| Sbjct 88631 GTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCG 88690 Query 63383 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 63442 || || | ||||| ||||| || || ||||| |||||| |||||| | || || Sbjct 88691 CAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAG 88750 Query 63443 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTA 63502 || |||| || | | || || ||||| || | ||||| || ||||| || Sbjct 88751 CACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTG 88810 Query 63503 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63562 || |||| | || | || ||||||||||||||| || || ||||| | Sbjct 88811 AAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAG 88870 Query 63563 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63622 || || || || |||||||| | ||||||||| || | ||| |||| ||| | | Sbjct 88871 ATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGC 88930 Query 63623 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63682 || | | ||| || ||||| || || || || || || | || |||||||| Sbjct 88931 TTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGG 88990 Query 63683 TCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 || || | ||| | |||| ||| | ||||| Sbjct 88991 TCATATACAATGGCAGAGTCGAGCTCGTCCTT 89022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628237810000