Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 100 2e-16 >seq4 Length=784365 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | ||||| || || ||||||||||| ||| Sbjct 46935 ATACCACCACGAAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCG 46994 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||||| || || || || || || || |||| || ||||| ||||| || Sbjct 46995 GACAGAGTACGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCGGGG 47054 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||||| ||| ||| Sbjct 47055 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAGGACTCG 47114 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || || || || ||||| || ||||| Sbjct 47115 ACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 47164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131967815700