Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 >seq2 Length=950389 Score = 86.0 bits (94), Expect = 6e-12 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 20221 AAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCT 20280 ||||| || ||| | |||| | ||||| |||| ||| | ||| ||||| | |||||| Sbjct 624042 AAACTACCTGGGAC-AAGATCGCACACATGTGCAATCATGTGAGTCAAGAGCGCATAGCT 623984 Query 20281 GGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACA 20337 ||||||||| || || |||||||||||||| || | |||| ||| || ||||| || Sbjct 623983 GGCAATGTTGAACGGCACTCCCAAACCCATATCGCATGACCGCTGGTAAAGCTGGCA 623927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441370179349000