Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq88 143 6e-29
>seq88
Length=140259
Score = 143 bits (158), Expect = 6e-29
Identities = 317/467 (68%), Gaps = 10/467 (2%)
Strand=Plus/Minus
Query 243292 GCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTG 243350
||| ||||||| || |||| | ||| ||||| ||||| | || ||| ||||
Sbjct 57344 GCTCAGCGTCTGGTTGCCTTCGC-TGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGC 57286
Query 243351 CGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTT 243410
| ||||||| |||||| ||| ||| |||||||||| || | || |||||| |
Sbjct 57285 CTCCATCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCT 57226
Query 243411 CATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCA 243470
||| ||| |||||||| || ||| | |||| | || ||| || | ||
Sbjct 57225 GATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTGCTGTTCTCTCACCTGAG 57166
Query 243471 GAACAAGCTACCATTCGAAACG---GTCAAACAAATCATCACAGAAGCAGTTGAAAACGA 243527
|||| | ||| | | || ||| | | |||||||| || || || | | ||
Sbjct 57165 GAACCGCC--CCAG-CAAGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCGTCATTGA 57109
Query 243528 AAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCAT 243587
||||| ||| | ||| ||| |||| ||| | || | ||||||||| | | || ||
Sbjct 57108 GAAGGAGTTCTTGACCGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGAT 57049
Query 243588 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGT 243647
| ||||||||||| ||||| |||||||| | | |||| ||||| | ||||| ||
Sbjct 57048 GAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACGAGAAGGT 56989
Query 243648 GTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAA 243707
||||| || | |||||||| | ||| |||||| ||| || ||| || || || ||
Sbjct 56988 CTACAAGTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAA 56929
Query 243708 CTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
||||||||| ||||||||| |||| || || | | || ||||| |||
Sbjct 56928 CTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTCATG 56883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873287941250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |