Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq14 244 1e-59 >seq14 Length=442650 Score = 244 bits (270), Expect = 1e-59 Identities = 507/745 (68%), Gaps = 10/745 (1%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956 || || |||||||| || || || || ||| ||| |||| ||||| ||||| | ||| Sbjct 88797 CCTACACTGTTCAATGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGAC 88738 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| || || || | ||| | |||||| || || | ||||| Sbjct 88737 -ATGAAGGATGACAGTATTGAAGGTATCTACGATACTCTCAAGACTTGCGCCATGATCTC 88679 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | |||||| |||| ||||||| || || ||| Sbjct 88678 CAAGATGGCCGGAGGTATTGGTCTGAACGTCCAC--CGTATCCGTGCCACTGGCTCTTAC 88621 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| ||||| || ||||| || | || ||||| || |||||||||||| Sbjct 88620 ATCGCCGGTACCAACGGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAAC 88561 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || ||||| |||||||||||| | | | ||| ||||||| |||| || Sbjct 88560 ACTGCCCGTTACGTTGACCAGGGTGGTAATAAGCGTCCTGGTGCTTTCGCTATCTACCTG 88501 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| || || | ||| ||||| |||||||||||||||| || || Sbjct 88500 GAGCCATGGCACGCTGATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAG 88441 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||||||||| ||||||||| | || ||||| || ||||| || Sbjct 88440 GAGGTCCGAGCCCGCGACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGG 88381 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || ||||| ||| || ||||| || | || ||||| || || || || || | ||| Sbjct 88380 GTTGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGAC 88321 Query 94375 GTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCA 94432 | || | || || || || |||| | ||||| | | ||| | |||| Sbjct 88320 TGCTACGG-TGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCCGCGGCC- 88263 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| ||| | ||| |||||||||| | ||| | || | ||| ||||| | Sbjct 88262 GCAAGACCATGAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCG 88203 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | | || | ||| | | |||||| | |||| |||| ||||||| || |||| | Sbjct 88202 GCAACCCTTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 88143 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| || |||||||||||||| ||||||| | |||| || ||| Sbjct 88142 GAACCATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGG 88083 Query 94613 TTGCTGTGTGTAACCTGGGCTCCAT 94637 | ||||| || ||||||| |||||| Sbjct 88082 TGGCTGTCTGCAACCTGGCCTCCAT 88058 Score = 113 bits (124), Expect = 4e-20 Identities = 242/359 (67%), Gaps = 2/359 (1%) Strand=Plus/Minus Query 95003 TTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCG 95062 |||| | ||| | ||||| || |||| || | ||| | |||||||| ||| | | Sbjct 87704 TTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTTTGGGACTGGGATGCTTTGAAGG 87645 Query 95063 CTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTG-TGGCCCCCATGCCCACGGCC 95121 | | | | | |||||| | |||| ||| ||| |||| |||||||| || || Sbjct 87644 CAAAGATCAAGGAGCACGGTATCCGAAACA-GCTTGTTGATGGCGCCCATGCCTACCGCA 87586 Query 95122 TCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTAC 95181 ||||| ||||||| || ||||||||||||| ||||| || | |||||| ||| | ||| Sbjct 87585 TCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCTAACATCTAC 87526 Query 95182 AACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTG 95241 | | || ||||| || || || |||| ||| ||||| || || |||||||| Sbjct 87525 CAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTACTCAGGGACCTG 87466 Query 95242 ACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCC 95301 || | ||| ||||| ||| | ||||||| | | || | || || Sbjct 87465 ACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATCATTGCCGAAGATGGTTCT 87406 Query 95302 GTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGA 95360 ||||||||||||| || |||| || |||||||| | ||||||||||| ||||| Sbjct 87405 ATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGTACAAGACCGTCTGGGA 87347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720262581000