Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq14 244 1e-59
>seq14
Length=442650
Score = 244 bits (270), Expect = 1e-59
Identities = 507/745 (68%), Gaps = 10/745 (1%)
Strand=Plus/Minus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956
|| || |||||||| || || || || ||| ||| |||| ||||| ||||| | |||
Sbjct 88797 CCTACACTGTTCAATGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGAC 88738
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| |||| ||| || || || | ||| | |||||| || || | |||||
Sbjct 88737 -ATGAAGGATGACAGTATTGAAGGTATCTACGATACTCTCAAGACTTGCGCCATGATCTC 88679
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074
|| || || || || || | | |||||| |||| ||||||| || || |||
Sbjct 88678 CAAGATGGCCGGAGGTATTGGTCTGAACGTCCAC--CGTATCCGTGCCACTGGCTCTTAC 88621
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
||| ||||||||| ||||| || ||||| || | || ||||| || ||||||||||||
Sbjct 88620 ATCGCCGGTACCAACGGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAAC 88561
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || || ||||| |||||||||||| | | | ||| ||||||| |||| ||
Sbjct 88560 ACTGCCCGTTACGTTGACCAGGGTGGTAATAAGCGTCCTGGTGCTTTCGCTATCTACCTG 88501
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||||| || || | ||| ||||| |||||||||||||||| || ||
Sbjct 88500 GAGCCATGGCACGCTGATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAG 88441
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
|| | ||| | ||||||||| ||||||||| | || ||||| || ||||| ||
Sbjct 88440 GAGGTCCGAGCCCGCGACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGG 88381
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|| ||||| ||| || ||||| || | || ||||| || || || || || | |||
Sbjct 88380 GTTGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGAC 88321
Query 94375 GTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGA-ATCGCAGGGCAAGGCCA 94432
| || | || || || || |||| | ||||| | | ||| | ||||
Sbjct 88320 TGCTACGG-TGACGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCCGCGGCC- 88263
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| ||| ||| | ||| |||||||||| | ||| | || | ||| ||||| |
Sbjct 88262 GCAAGACCATGAAGGCTCAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCG 88203
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| | || | ||| | | |||||| | |||| |||| ||||||| || |||| |
Sbjct 88202 GCAACCCTTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 88143
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||| ||||| || |||||||||||||| ||||||| | |||| || |||
Sbjct 88142 GAACCATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGG 88083
Query 94613 TTGCTGTGTGTAACCTGGGCTCCAT 94637
| ||||| || ||||||| ||||||
Sbjct 88082 TGGCTGTCTGCAACCTGGCCTCCAT 88058
Score = 113 bits (124), Expect = 4e-20
Identities = 242/359 (67%), Gaps = 2/359 (1%)
Strand=Plus/Minus
Query 95003 TTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCG 95062
|||| | ||| | ||||| || |||| || | ||| | |||||||| ||| | |
Sbjct 87704 TTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTTTGGGACTGGGATGCTTTGAAGG 87645
Query 95063 CTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTG-TGGCCCCCATGCCCACGGCC 95121
| | | | | |||||| | |||| ||| ||| |||| |||||||| || ||
Sbjct 87644 CAAAGATCAAGGAGCACGGTATCCGAAACA-GCTTGTTGATGGCGCCCATGCCTACCGCA 87586
Query 95122 TCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTAC 95181
||||| ||||||| || ||||||||||||| ||||| || | |||||| ||| | |||
Sbjct 87585 TCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCTAACATCTAC 87526
Query 95182 AACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTG 95241
| | || ||||| || || || |||| ||| ||||| || || ||||||||
Sbjct 87525 CAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTACTCAGGGACCTG 87466
Query 95242 ACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCC 95301
|| | ||| ||||| ||| | ||||||| | | || | || ||
Sbjct 87465 ACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATCATTGCCGAAGATGGTTCT 87406
Query 95302 GTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGA 95360
||||||||||||| || |||| || |||||||| | ||||||||||| |||||
Sbjct 87405 ATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGTACAAGACCGTCTGGGA 87347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720262581000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |