Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq14 131 2e-25 seq4 113 4e-20 seq5 102 8e-17 seq80 91.5 1e-13 >seq14 Length=442650 Score = 131 bits (144), Expect = 2e-25 Identities = 928/1460 (64%), Gaps = 80/1460 (5%) Strand=Plus/Plus Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACG 146122 ||||||| ||||| |||||||| || || || || | | | || | ||| |||| | | Sbjct 87486 GGTTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATG 87545 Query 146123 GCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCA 146182 ||||||| |||||||||| || || ||||||| || | |||||||||||| ||||| Sbjct 87546 GCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCA 87605 Query 146183 CCAGCAAAGAGTTTCTCACGCCGTG-TCTTTGAATCTTTTCC--CGTAGTTTGGACCAAT 146239 || ||| ||||| | ||||| || ||| |||||| || | || | || | Sbjct 87606 TCAACAAGCTGTTTCGGATACCGTGCTCCTTG-ATCTTTGCCTTCAAAGCAT---CCCAG 87661 Query 146240 TCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCA-TAGTGCC-GCGGAA 146297 ||| |||| |||| | || | || | |||| || || | || || ||| | Sbjct 87662 TCC-CAAA-GATCAGAAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGA 87719 Query 146298 CAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGC 146357 | ||||| | |||||| | | || || ||||| | |||||| | ||||| || Sbjct 87720 C-GGGGGAT-CCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGC 87777 Query 146358 TTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCT-CCTGGCCTCCT 146416 || ||| | ||| |||||||| |||| | ||| | ||| | ||||| Sbjct 87778 AGTCAAAGCAGCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCA-GCTGGCGAGCCTCAG 87836 Query 146417 CGCTGTCGTAGGGGATATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACAC 146476 | || | || || |||| || ||||| ||||| |||||||| | || |||| Sbjct 87837 GGGACTCAAATGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACAC 87896 Query 146477 CAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGT 146536 ||| ||| | |||| | |||| ||||| || || ||| ||||||||| | Sbjct 87897 CAATGGGCCTGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACAT 87956 Query 146537 CGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCA---GCAGGACAT 146593 | ||||||||||| || || || || || | | || | | | || ||| | Sbjct 87957 CAATGATCTTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGT 88016 Query 146594 AGT--CAAATGTTTTAGT-TTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGT 146650 || || |||||| || | ||| | | | || | || || || ||||||| || Sbjct 88017 TGTAGCAGTTGTTTTCGTAGTCAACAT--ATG--CTGGCAGA--GCAATGGAGGCCAGGT 88070 Query 146651 TACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGC 146710 | || || || ||| || | || |||| | ||||||| ||| |||||| || Sbjct 88071 TGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGC 88130 Query 146711 ACTTGATGATGCCCAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAGA 146767 |||| | |||| || || ||||| || ||| |||||||| |||||||||| Sbjct 88131 TGCGGATGGTTCCCAGGTTCTTCTGGTTGCT---CTTGCGGTTGCAGGCATCCTTGTAGA 88187 Query 146768 GCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAATC-TCTG 146826 ||||| | || ||||| ||| | || ||||| |||| | | || | | |||| Sbjct 88188 GCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG--GCGTACCACAGCTTCTG 88245 Query 146827 -GCCTTTACTTGTCTTTCGTACAGTTTATTCT-TTTCGTATTTCTCGTACAATATTTCAA 146884 ||||| | | ||||| || | |||| | ||||| |||||||||| || Sbjct 88246 AGCCTTCA-TGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGCCTC-G 88303 Query 146885 AACTAG-AACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCAT 146943 |||| | |||||| ||| ||||| || ||| ||||| || | || | ||| Sbjct 88304 AACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAG 88363 Query 146944 TCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAG 147003 || |||| || || || | ||| || | || |||||||| || | || | | | Sbjct 88364 TCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGG 88423 Query 147004 TCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATT 147063 ||||| || | | ||||| || ||| || ||||| ||||| ||| | | Sbjct 88424 TCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACA 88483 Query 147064 TCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGC---TTACCGCCCTGA 147120 || | ||||| ||||||| ||| |||| || || ||| ||||| ||||| Sbjct 88484 TCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTATTACCACCCTGG 88543 Query 147121 TCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGATTTT 147180 || |||| || | |||| |||||||| || | ||||| | || ||| ||| Sbjct 88544 TCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCG------TTT 88597 Query 147181 GTGGTGCCGTT-GTA--------TTGAGCGC---TG--ACG----CTTTGCACGCTCAGC 147222 | |||||||| ||| | || || || ||| | || ||| |||| Sbjct 88598 GACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGA 88657 Query 147223 CCGAGACCTCCGCCCAGATTCGAAATCAAAGCG-GACTCGTGCAAGGTCTTGTAGATGCC 147281 || | ||||||| ||| || || |||| ||| | || || | || | |||||| || Sbjct 88658 CCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTG-AGAGTATCGTAGATACC 88716 Query 147282 GTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGT 147341 || || ||||| ||||| ||| ||||| ||||| ||| || || | ||| Sbjct 88717 TTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGT 88776 Query 147342 GCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAA-----CGTGCCCAGACTCATCAAT 147396 || || ||||| || || ||||||||||| |||| || ||||| Sbjct 88777 ACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGC---GA--CATCAGG 88831 Query 147397 TGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATG 147456 | ||||| ||||| | ||| || ||||| || || | | || || |||||| Sbjct 88832 TTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCATG 88891 Query 147457 AGCATGTGCTGGGGTCGTTC 147476 | ||||||||| || ||||| Sbjct 88892 ATCATGTGCTGTGGCCGTTC 88911 >seq4 Length=784365 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || ||||| ||||| ||| | Sbjct 46938 CCACCACGAAGGCGGAGAACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 46997 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || ||||| ||||| || |||||| |||||||| ||||| || Sbjct 46998 AGAGTACGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCGGGGGGG 47057 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | |||| ||||| | |||||| Sbjct 47058 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGAGGACTCGACC 47117 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || ||||| || ||||| Sbjct 47118 TCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 47164 Score = 107 bits (118), Expect = 2e-18 Identities = 167/235 (71%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939 ||||| |||||| || | || | |||||| || | || ||||| || || |||||||| Sbjct 46704 TACTG-TCCACCACGCAGACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATATTGTA 46762 Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999 || || ||| || ||| || | ||| ||||||||| |||| | |||||||| || Sbjct 46763 GTCAGACAGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTC 46822 Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTAC 127058 || || || |||||||||||| ||| || ||| | |||| || | |||||| | Sbjct 46823 TGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTG-TCAATGGTGTCTGAGG 46881 Query 127059 TCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || || | || | |||||| || |||| || || || || |||||||| Sbjct 46882 ACTCCACCTCTAGTGTTATCGTTTTTCCCGTCAATGTCTTGACGAAGATCTGCAT 46936 Score = 105 bits (116), Expect = 6e-18 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| || || ||||| ||||| Sbjct 47196 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCG 47255 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || ||||| || |||||||||||| || || |||| Sbjct 47256 GCAAAGATCAGGCGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTTG 47315 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | | ||| || |||| ||| | || |||||||| || || Sbjct 47316 ACGTTG-TCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 47374 Query 127096 TTTTACAAAAATCTGCATGG 127115 || || || |||||||||| Sbjct 47375 CTTGACGAAGATCTGCATGG 47394 >seq5 Length=773751 Score = 102 bits (112), Expect = 8e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| || ||||| ||| || ||||| || || ||| ||||| Sbjct 717619 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 717560 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 ||||||||||| || || || ||||||||||||||| ||| || ||||| | ||| Sbjct 717559 AATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 717500 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | |||||| || | ||| | || ||||| ||||| || || || || Sbjct 717499 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 717441 >seq80 Length=149332 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||| | || | || ||| || || || ||||| ||| Sbjct 52911 CCACCACGGAGGCGCAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 52852 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || ||| |||||| |||||||| ||||| || Sbjct 52851 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 52792 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||||| | |||| |||||||| ||| || Sbjct 52791 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCCACC 52732 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || || || || || || || || || ||||||||| Sbjct 52731 TCAAGGGTGATGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATG 52684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497976714000