Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq14 291 1e-73 seq88 104 3e-17 >seq14 Length=442650 Score = 291 bits (322), Expect = 1e-73 Identities = 1194/1858 (64%), Gaps = 51/1858 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 |||||||||||||| ||| |||| | |||||||||||||| || |||||||| | Sbjct 87150 TGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 87209 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 || |||||||| | | ||||| | | |||| | || || || | |||| Sbjct 87210 CCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTGGG-CTCACGCATG 87268 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||| | | || || || ||||||||| || || || || | ||| | | Sbjct 87269 TGGATGTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCAGACATCTG---C 87325 Query 115705 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 ||| | || ||| || |||||| || || |||| | ||| ||||| | ||| Sbjct 87326 ACAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCGGG 87385 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCC 115818 || ||| || |||||||| ||| || | | | |||| | | ||||||| || Sbjct 87386 ATGCTGGGGATGTTCTGGATAGAACCATCTTC---GGCAATGATACGGTTCTTCATAGCC 87442 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAAC 115874 | ||||| |||||||||| | || ||| | | ||| | ||||| || Sbjct 87443 TCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGG----TTGACGACCTG 87498 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || || || |||| | | |||||||| | ||||||||||| |||||||| Sbjct 87499 GAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTC 87558 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||| |||| || || | |||||| || || |||||||| ||||| | | |||||| Sbjct 87559 GTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTGTT 87618 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTT 116052 |||| ||| | || | || | |||| | || |||||||| | | | || Sbjct 87619 TCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAGAA-- 87676 Query 116053 GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAAT 116112 | || | ||||||| ||| | || || || || || | || |||||||| || Sbjct 87677 GGCTGGACGCCCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGTAT 87736 Query 116113 GTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172 |||| |||||||| ||||||| || | ||| | ||| | || ||||| || Sbjct 87737 GTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGTAG 87796 Query 116173 ATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGACG 116231 || ||||| || || | |||| || | | |||| ||| ||||| | | || Sbjct 87797 ATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAG-CCTCAGGGGACTCAAATGGCATGCG 87855 Query 116232 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 116291 | | || |||| || ||||| |||||||| | ||||| || | |||| ||| Sbjct 87856 GAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCAT 87915 Query 116292 ATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351 || || || || |||||| || || ||| || | | | || || || Sbjct 87916 GTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTT 87975 Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 116411 || |||| |||| || || || | | | | | | | | | || | Sbjct 87976 GCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCGTA 88035 Query 116412 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 116471 | ||||| || || || || || ||||| || || |||| |||||| | | Sbjct 88036 GTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGC 88095 Query 116472 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 116531 | |||||| || || || || |||| || || || ||||| |||| |||||| || Sbjct 88096 ACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTG 88155 Query 116532 ATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591 || ||| ||| || ||||||||||||||||| | || | || ||||| || || Sbjct 88156 GTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTG 88215 Query 116592 GGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG-GCTCGC-CC 116648 || || ||| || || | ||| | | || | | || || ||| ||| | ||| | Sbjct 88216 GGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCT-TCA---TGGTCTTGCGGCCGCGGC 88271 Query 116649 CTCCTC-CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGC 116706 || ||| ||||||||| ||| || ||||| ||||| ||| || ||| || | || Sbjct 88272 CTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCA-CCGTAGCAGTCAGCAAGG 88330 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || || || | || || | ||| | ||| | || || |||||||||||||||| Sbjct 88331 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 88390 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 |||||||| || |||||||| || |||||| || || || | || || | || Sbjct 88391 AAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCG 88450 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || ||||| || | || || | || ||| |||||||| || |||||||| | Sbjct 88451 TGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 88510 Query 116887 GCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 |||| | || || | |||| |||||| || || | || || ||| || Sbjct 88511 GCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAG 88570 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACT 117001 || |||||||| ||||||||||| | || ||| || || || ||| || ||| | Sbjct 88571 ACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCC- 88629 Query 117002 TGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTG 117061 |||| | || | ||||| || || ||||||||| || ||| ||| ||||| | Sbjct 88630 -AGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGG 88688 Query 117062 CGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGA 117121 |||| | ||||| | ||||||| || || || |||| |||| | ||| ||||| Sbjct 88689 CGCAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGA 88748 Query 117122 AGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181 |||| ||||| || ||| || |||||||| ||||| || || || | ||||| Sbjct 88749 AGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCG 88808 Query 117182 TGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGT 117241 |||| | || |||||| | ||| ||||| | || ||| || || || Sbjct 88809 TGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCC 88868 Query 117242 GAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 117301 ||||| | | || ||||| | ||||| || || ||| | | | ||||||| Sbjct 88869 AGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGA 88928 Query 117302 GCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAA------ATAGCCAAAGTC 117353 || | ||||||| | |||||||||||||| || || |||||| ||||| Sbjct 88929 GCTTGAGGAGGTATGACCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTC 88986 >seq88 Length=140259 Score = 104 bits (114), Expect = 3e-17 Identities = 292/446 (65%), Gaps = 12/446 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| || | ||| ||| |||||||| Sbjct 56901 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 56960 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | || || | | | |||| |||| ||| Sbjct 56961 GAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTG-----CCAAGGGCGACAAGG 57015 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 ||||| || | ||| |||| ||||||| |||| | | |||||| |||| || Sbjct 57016 AGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGA 57075 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 | || || || || || | |||| ||||||||||| | || || || | ||| Sbjct 57076 CTGCAGGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATCAGTGATGATC 57135 Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAA 127524 | | | || | || | || | | | || ||| || ||| || Sbjct 57136 TTCTCGACACGCGCCTTGCTGGGGCGGTTCC-TCAGGTGAGAGAACAGCAGGCAAGCGAA 57194 Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584 || ||| |||||||||||||| ||||| || || || |||||| |||||| ||||| Sbjct 57195 GTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCAGGCAT 57254 Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644 | ||| |||||||||| |||||| || | || | || ||||||||| ||||| Sbjct 57255 CAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTC 57314 Query 127645 CACACACGCGAACGCAAATAGACGCT 127670 ||| ||||| |||| ||||||| Sbjct 57315 AACAGCAGCGAAGGCAACCAGACGCT 57340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503557301000