Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq90 394 1e-104 seq4 138 1e-27 seq47 131 2e-25 seq12 104 3e-17 >seq90 Length=136398 Score = 394 bits (436), Expect = 1e-104 Identities = 962/1452 (66%), Gaps = 17/1452 (1%) Strand=Plus/Minus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||| || || || || |||||| | || || || | |||| || ||| | Sbjct 106664 CCCTTGTCGTTGGTGATGACAATCTTGTTGGTCTTGCCGGTACCCTTCTCAAGGGCAGAT 106605 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || |||| ||||| || |||||||||||||| | || | || || || ||| | Sbjct 106604 ACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCGATCTGAGGAACACCACGG 106545 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 ||||||| || || || || | || || | || || | |||| ||| | | | Sbjct 106544 GGTGCGGGGGGGATGCCGGTAAGCTCGAACTTGCCGAGCAGGTTGTTGTCCTTGGTGCGC 106485 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874 | ||| ||||| || ||||| | || || |||| || || || || ||| Sbjct 106484 TGACGCTCACCCTCGTAGACCTGGATGAGGACACCAGGCTGGTTGTCGGAGAAGGTAGAG 106425 Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934 |||| | ||||| | ||||| || || || | || || | | |||||| ||| Sbjct 106424 AAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATGAGCTTGGTCATCATA 106365 Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGA 6994 ||||| || || | ||||||||||| |||| || |||| || | | || | Sbjct 106364 CCACCAGCGGTCTCAATACCAAGAGACAGCGGTGCGACATCCAGAAGCAGGATCTCGTTG 106305 Query 6995 ACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCG 7051 || | | | ||||| | | ||||||||| ||||| | || ||||| || Sbjct 106304 GTGGACTTGGAGCTGGTGTCACCAGACAGGATGGCGGCCTGGACGGCGGCACCGTAGGCA 106245 Query 7052 ACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAAC 7111 || |||||||||||||| || | || || | || || ||||| || || || | | | Sbjct 106244 ACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCGGTGATC 106185 Query 7112 ATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTC 7171 | | || || ||||| || || || || ||||||| ||||| || | || | Sbjct 106184 AGCTTCTGGATACGGGGGATACGGGTAGAACCTCCGACCAGGACGATCTCGTGGACCTGA 106125 Query 7172 GATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGG 7228 || || |||||||| | ||| || || || || | || || | ||| Sbjct 106124 GACTTGTCGATCTTGGCGTCGGTCAGGACACGGTCAACGGGCTGCAGGGTAGAG---CGG 106068 Query 7229 AACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACG 7288 || | |||| || || ||||| ||||| |||||||| ||||| || ||||| |||| Sbjct 106067 AAGAGGTCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAATA 106008 Query 7289 CCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTT 7348 || ||| | | || || || || |||| || || || | || || | |||||||| Sbjct 106007 CCCTCGAACAGGGAGTCGATCTCGATGGAGGTCTGAGCGGAAGAGGACAGAGTTCGCTTA 105948 Query 7349 GCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTC 7408 || ||||| || || || || | |||||| || ||||| ||||| || | || ||| Sbjct 105947 GCACGCTCGCAAGCAGTGCGGAGACGACGCAGAGCACGGGGGTTGGAAGACAAGTCCTTC 105888 Query 7409 TTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467 |||||||| ||||| || || |||| |||||| | ||| | ||||| || || Sbjct 105887 TTATGTTTGCGTTTGAATTCGTTCAC-GAAGTGGTTGACGAGACGGTTGTCGAAGTCCTC 105829 Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527 |||||||||||| || || || ||||| | ||||| || |||||||| | || ||| | Sbjct 105828 ACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATGGT 105769 Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587 | || || ||||| || |||||||||||||| || || ||||| ||||| ||| | Sbjct 105768 CAGCAGGGACACATCGAAGGTACCACCACCCAGATCGAAGATGAGGACGTTGCGCTCGCC 105709 Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647 || ||||| ||||||||||| |||||||| || || || || || || || ||||| Sbjct 105708 CTCGACCTTCTTGTCGAGACCGTAAGCGATAGCAGCGGCGGTAGGCTCGTTGATGATACG 105649 Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707 ||| ||||||||||||||| | || || || || ||||| || || || ||||| Sbjct 105648 GAGAACGTTCAGGCCAGCAATGAGACCGGCGTCCTTAGTGGCTTGACGCTGAGAGTCGTT 105589 Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767 |||||||| || || || ||||| |||| | || | ||| || || | || || Sbjct 105588 GAAGTAGGCAGGAACGGTGACGACAGCGTTGTTAACGGTGCCACCCAGGTATGCCTCAGC 105529 Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827 | | || ||| ||||| || ||||| || || ||||| || | | || || || Sbjct 105528 GGTCTCACGCATCTTGGTCAGGACCATGGAGGAGATCTCCTCCGGAGTGAAGGTCTTGGT 105469 Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887 || || || || || || ||||| || ||| || | | ||||||||| | Sbjct 105468 CTCGCCCTTGAACTCGACCTCAATGGCAGGCTTA---CCACCCTTGTCGATAACCTTGAA 105412 Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947 | | | ||||| ||| | || |||| |||| ||||| | || || | || Sbjct 105411 GGGGAAGTGCTTCATGTCGGCCTGAACCTCAGGGTCGAGGAACTTGCGACCAATCAACCG 105352 Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007 ||| ||||| || || ||||| | ||||||||| || |||||||| || || || || Sbjct 105351 CTTCGCATCGAAGACGGTGTTGTGGGGGTTCATAGCGACCTGGTTCTTGGCGGCATCTCC 105292 Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067 ||| | ||| || | | || || || || ||| | || || || || || || || || Sbjct 105291 GATCAAACGCTC---AGTGTCGGTGAAAGCAACGAAAGAAGGCGTTGTGCGGTTACCCTG 105235 Query 8068 GTCGTTCGCAAT 8079 |||||| ||||| Sbjct 105234 GTCGTTGGCAAT 105223 >seq4 Length=784365 Score = 138 bits (152), Expect = 1e-27 Identities = 245/354 (69%), Gaps = 5/354 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || ||||| |||||||| | ||| || || || || || || ||| || |||| ||| Sbjct 136665 TCAAAATCCTCACCACCAAGGTGGGTGTCACCGGCAGTAGCCAAGACCTCGAAGACACCC 136606 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | || ||||| || ||||| ||||| || || | || | | Sbjct 136605 TGGTCGATAGAGAGGAGGGAGACATCGAAAGTACCGCCACCAAGATCGTA---GACAATG 136549 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || ||| | | | |||| || ||||||||||||||||| || ||||| || || Sbjct 136548 ATC-TGGCGCTCGCCGTCGGTCTTGTCCAGACCGTACGCGATAGCGGCGGCCGTGGGCTC 136490 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||| |||||| || ||| || || || ||| || | ||||| || || || || || Sbjct 136489 GTTAACAATACGGAGGACGTTGAGACCGGCGATAATTCCGGCATCCTTGGTAGCCTGGCG 136430 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||| ||||| Sbjct 136429 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTTCCGAG 136370 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || || | || ||||| ||| | || ||| | || ||||| || Sbjct 136369 GTAAGACTCGGCCACCTCCTTCATCTTGCCCAAAATCATGGCGGAGATCTCCTC 136316 >seq47 Length=232334 Score = 131 bits (144), Expect = 2e-25 Identities = 358/544 (66%), Gaps = 11/544 (2%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| ||||| ||||| || || | |||| ||| || |||| || | | Sbjct 103646 CAGGTCCTCGAAACGGGCACGAGTGATCTGCATGTT--GAAGTCCTCGCCATCAAAGAGA 103703 Query 7301 GAATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || || || |||||||| | || || || | ||| || ||||| || ||||| | Sbjct 103704 GAGTCGATCTCAATGGTGGCCTGAGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGC 103761 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || || || | | ||||| ||||| | | ||||| | || ||||| || | Sbjct 103762 AAGCGGTACGGAGTCTTCGAAGAGCACGGGCATCTCCGGAGAGGTCCTTCTTGGTCTTGC 103821 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | ||||| | | |||| || || | | |||||||| | ||||||||||| Sbjct 103822 GGGAGAACTCCTTCTTGCAGTGGTCCAGCAGGTTGGTGTCGAAATCCTGACCACCCAAGT 103881 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | || || || ||||| || ||||| |||| ||| || | ||||| | | || | Sbjct 103882 GGGTGTCACCAGCGGTAGCCTTGACGGTGAAGACACCACCCTGGATGTTAAGGAGAGAGA 103941 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGT 7595 |||| || |||||||||||||| || | || || ||||| | | || | |||| Sbjct 103942 CATCGAAAGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTTGGACTTGT 104001 Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655 | |||||||||| |||||||| || || || || || || || ||||| || || Sbjct 104002 TGGAGCCGAGACCGTAGGCGATAGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACGT 104061 Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715 | || || | || | | || || || || || || || || ||||| ||||||| Sbjct 104062 TAAGACCGGAGATGGAACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGG 104121 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 | ||||| || | ||| || | | ||| ||||| || || | ||| || || || | Sbjct 104122 CAGGGACGGTGATGACGGCCTTCTCGACCTTCTTGCCCAGCTTAACTTCGGCAATCTCCT 104181 Query 7776 TCAT 7779 |||| Sbjct 104182 TCAT 104185 >seq12 Length=463815 Score = 104 bits (114), Expect = 3e-17 Identities = 195/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||| | ||||| ||||||| ||| Sbjct 443249 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGTTGGTAGACTTGACCTCAAAGACACCG 443190 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || | | || || | ||| || ||||||||||| || || | | ||| Sbjct 443189 TTCTGGATCTCCAGCACGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGACG 443130 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | ||| ||||||||||| |||| || || || || || || Sbjct 443129 A------CGCGGTCAGCCTCCTTCTCGAGACCGTAAGCGAGGGCAGCAGCGGTAGGCTCG 443076 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| | ||| ||| |||||| || ||||| | ||||| || || ||||| || Sbjct 443075 TTAACGACACGGAGAACGTTCAGACCGGCAATCTGACCGGCATCCTTGGTAGCTTGACGC 443016 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743 || || ||||| |||||||| ||||| || || || |||| | |||| Sbjct 443015 TGGGAGTCGTTGAAGTAGGCGGGGACGGTAACAACGGCGTTCTTGAC 442969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129028899000