Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq90 394 1e-104
seq4 138 1e-27
seq47 131 2e-25
seq12 104 3e-17
>seq90
Length=136398
Score = 394 bits (436), Expect = 1e-104
Identities = 962/1452 (66%), Gaps = 17/1452 (1%)
Strand=Plus/Minus
Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694
||||| || || || || |||||| | || || || | |||| || ||| |
Sbjct 106664 CCCTTGTCGTTGGTGATGACAATCTTGTTGGTCTTGCCGGTACCCTTCTCAAGGGCAGAT 106605
Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754
|| |||| ||||| || |||||||||||||| | || | || || || ||| |
Sbjct 106604 ACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCGATCTGAGGAACACCACGG 106545
Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814
||||||| || || || || | || || | || || | |||| ||| | | |
Sbjct 106544 GGTGCGGGGGGGATGCCGGTAAGCTCGAACTTGCCGAGCAGGTTGTTGTCCTTGGTGCGC 106485
Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874
| ||| ||||| || ||||| | || || |||| || || || || |||
Sbjct 106484 TGACGCTCACCCTCGTAGACCTGGATGAGGACACCAGGCTGGTTGTCGGAGAAGGTAGAG 106425
Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934
|||| | ||||| | ||||| || || || | || || | | |||||| |||
Sbjct 106424 AAGACCTCGGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGGATGAGCTTGGTCATCATA 106365
Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGA 6994
||||| || || | ||||||||||| |||| || |||| || | | || |
Sbjct 106364 CCACCAGCGGTCTCAATACCAAGAGACAGCGGTGCGACATCCAGAAGCAGGATCTCGTTG 106305
Query 6995 ACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCG 7051
|| | | | ||||| | | ||||||||| ||||| | || ||||| ||
Sbjct 106304 GTGGACTTGGAGCTGGTGTCACCAGACAGGATGGCGGCCTGGACGGCGGCACCGTAGGCA 106245
Query 7052 ACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAAC 7111
|| |||||||||||||| || | || || | || || ||||| || || || | | |
Sbjct 106244 ACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCGGTGATC 106185
Query 7112 ATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTC 7171
| | || || ||||| || || || || ||||||| ||||| || | || |
Sbjct 106184 AGCTTCTGGATACGGGGGATACGGGTAGAACCTCCGACCAGGACGATCTCGTGGACCTGA 106125
Query 7172 GATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGG 7228
|| || |||||||| | ||| || || || || | || || | |||
Sbjct 106124 GACTTGTCGATCTTGGCGTCGGTCAGGACACGGTCAACGGGCTGCAGGGTAGAG---CGG 106068
Query 7229 AACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACG 7288
|| | |||| || || ||||| ||||| |||||||| ||||| || ||||| ||||
Sbjct 106067 AAGAGGTCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAATA 106008
Query 7289 CCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTT 7348
|| ||| | | || || || || |||| || || || | || || | ||||||||
Sbjct 106007 CCCTCGAACAGGGAGTCGATCTCGATGGAGGTCTGAGCGGAAGAGGACAGAGTTCGCTTA 105948
Query 7349 GCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTC 7408
|| ||||| || || || || | |||||| || ||||| ||||| || | || |||
Sbjct 105947 GCACGCTCGCAAGCAGTGCGGAGACGACGCAGAGCACGGGGGTTGGAAGACAAGTCCTTC 105888
Query 7409 TTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTC 7467
|||||||| ||||| || || |||| |||||| | ||| | ||||| || ||
Sbjct 105887 TTATGTTTGCGTTTGAATTCGTTCAC-GAAGTGGTTGACGAGACGGTTGTCGAAGTCCTC 105829
Query 7468 ACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTT 7527
|||||||||||| || || || ||||| | ||||| || |||||||| | || ||| |
Sbjct 105828 ACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATGGT 105769
Query 7528 TAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC 7587
| || || ||||| || |||||||||||||| || || ||||| ||||| ||| |
Sbjct 105768 CAGCAGGGACACATCGAAGGTACCACCACCCAGATCGAAGATGAGGACGTTGCGCTCGCC 105709
Query 7588 GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG 7647
|| ||||| ||||||||||| |||||||| || || || || || || || |||||
Sbjct 105708 CTCGACCTTCTTGTCGAGACCGTAAGCGATAGCAGCGGCGGTAGGCTCGTTGATGATACG 105649
Query 7648 AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTT 7707
||| ||||||||||||||| | || || || || ||||| || || || |||||
Sbjct 105648 GAGAACGTTCAGGCCAGCAATGAGACCGGCGTCCTTAGTGGCTTGACGCTGAGAGTCGTT 105589
Query 7708 AAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGC 7767
|||||||| || || || ||||| |||| | || | ||| || || | || ||
Sbjct 105588 GAAGTAGGCAGGAACGGTGACGACAGCGTTGTTAACGGTGCCACCCAGGTATGCCTCAGC 105529
Query 7768 GATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT 7827
| | || ||| ||||| || ||||| || || ||||| || | | || || ||
Sbjct 105528 GGTCTCACGCATCTTGGTCAGGACCATGGAGGAGATCTCCTCCGGAGTGAAGGTCTTGGT 105469
Query 7828 TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATA 7887
|| || || || || || ||||| || ||| || | | ||||||||| |
Sbjct 105468 CTCGCCCTTGAACTCGACCTCAATGGCAGGCTTA---CCACCCTTGTCGATAACCTTGAA 105412
Query 7888 CGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACG 7947
| | | ||||| ||| | || |||| |||| ||||| | || || | ||
Sbjct 105411 GGGGAAGTGCTTCATGTCGGCCTGAACCTCAGGGTCGAGGAACTTGCGACCAATCAACCG 105352
Query 7948 CTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCC 8007
||| ||||| || || ||||| | ||||||||| || |||||||| || || || ||
Sbjct 105351 CTTCGCATCGAAGACGGTGTTGTGGGGGTTCATAGCGACCTGGTTCTTGGCGGCATCTCC 105292
Query 8008 GATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTG 8067
||| | ||| || | | || || || || ||| | || || || || || || || ||
Sbjct 105291 GATCAAACGCTC---AGTGTCGGTGAAAGCAACGAAAGAAGGCGTTGTGCGGTTACCCTG 105235
Query 8068 GTCGTTCGCAAT 8079
|||||| |||||
Sbjct 105234 GTCGTTGGCAAT 105223
>seq4
Length=784365
Score = 138 bits (152), Expect = 1e-27
Identities = 245/354 (69%), Gaps = 5/354 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| ||||| |||||||| | ||| || || || || || || ||| || |||| |||
Sbjct 136665 TCAAAATCCTCACCACCAAGGTGGGTGTCACCGGCAGTAGCCAAGACCTCGAAGACACCC 136606
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| || | | || ||||| || ||||| ||||| || || | || | |
Sbjct 136605 TGGTCGATAGAGAGGAGGGAGACATCGAAAGTACCGCCACCAAGATCGTA---GACAATG 136549
Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | || ||| | | | |||| || ||||||||||||||||| || ||||| || ||
Sbjct 136548 ATC-TGGCGCTCGCCGTCGGTCTTGTCCAGACCGTACGCGATAGCGGCGGCCGTGGGCTC 136490
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|||| |||||| || ||| || || || ||| || | ||||| || || || || ||
Sbjct 136489 GTTAACAATACGGAGGACGTTGAGACCGGCGATAATTCCGGCATCCTTGGTAGCCTGGCG 136430
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| ||||| |||||||| ||||| || ||||| |||| ||||| ||||| |||||
Sbjct 136429 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTTCCGAG 136370
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|| || || || | || ||||| ||| | || ||| | || ||||| ||
Sbjct 136369 GTAAGACTCGGCCACCTCCTTCATCTTGCCCAAAATCATGGCGGAGATCTCCTC 136316
>seq47
Length=232334
Score = 131 bits (144), Expect = 2e-25
Identities = 358/544 (66%), Gaps = 11/544 (2%)
Strand=Plus/Plus
Query 7243 CAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAAC 7300
||| ||||| ||||| ||||| || || | |||| ||| || |||| || | |
Sbjct 103646 CAGGTCCTCGAAACGGGCACGAGTGATCTGCATGTT--GAAGTCCTCGCCATCAAAGAGA 103703
Query 7301 GAATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358
|| || || |||||||| | || || || | ||| || ||||| || ||||| |
Sbjct 103704 GAGTCGATCTCAATGGTGGCCTGAGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGC 103761
Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418
| || || || | | ||||| ||||| | | ||||| | || ||||| || |
Sbjct 103762 AAGCGGTACGGAGTCTTCGAAGAGCACGGGCATCTCCGGAGAGGTCCTTCTTGGTCTTGC 103821
Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478
| ||||| | | |||| || || | | |||||||| | |||||||||||
Sbjct 103822 GGGAGAACTCCTTCTTGCAGTGGTCCAGCAGGTTGGTGTCGAAATCCTGACCACCCAAGT 103881
Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538
| || || || ||||| || ||||| |||| ||| || | ||||| | | || |
Sbjct 103882 GGGTGTCACCAGCGGTAGCCTTGACGGTGAAGACACCACCCTGGATGTTAAGGAGAGAGA 103941
Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGT 7595
|||| || |||||||||||||| || | || || ||||| | | || | ||||
Sbjct 103942 CATCGAAAGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTTGGACTTGT 104001
Query 7596 TCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGT 7655
| |||||||||| |||||||| || || || || || || || ||||| || ||
Sbjct 104002 TGGAGCCGAGACCGTAGGCGATAGCGGCAGCGGTGGGCTCGTTGATGATACGGAGGACGT 104061
Query 7656 TCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715
| || || | || | | || || || || || || || || ||||| |||||||
Sbjct 104062 TAAGACCGGAGATGGAACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGG 104121
Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775
| ||||| || | ||| || | | ||| ||||| || || | ||| || || || |
Sbjct 104122 CAGGGACGGTGATGACGGCCTTCTCGACCTTCTTGCCCAGCTTAACTTCGGCAATCTCCT 104181
Query 7776 TCAT 7779
||||
Sbjct 104182 TCAT 104185
>seq12
Length=463815
Score = 104 bits (114), Expect = 3e-17
Identities = 195/287 (68%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || ||| | ||||| ||||||| |||
Sbjct 443249 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGTTGGTAGACTTGACCTCAAAGACACCG 443190
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || | | || || | ||| || ||||||||||| || || | | |||
Sbjct 443189 TTCTGGATCTCCAGCACGGAGATATCGAAGGTACCACCACCAAGATCGTAGACAGCGACG 443130
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | ||| ||||||||||| |||| || || || || || ||
Sbjct 443129 A------CGCGGTCAGCCTCCTTCTCGAGACCGTAAGCGAGGGCAGCAGCGGTAGGCTCG 443076
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|||| | ||| ||| |||||| || ||||| | ||||| || || ||||| ||
Sbjct 443075 TTAACGACACGGAGAACGTTCAGACCGGCAATCTGACCGGCATCCTTGGTAGCTTGACGC 443016
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGAC 7743
|| || ||||| |||||||| ||||| || || || |||| | ||||
Sbjct 443015 TGGGAGTCGTTGAAGTAGGCGGGGACGGTAACAACGGCGTTCTTGAC 442969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129028899000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |