Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14 327 1e-84 seq88 116 5e-21 >seq14 Length=442650 Score = 327 bits (362), Expect = 1e-84 Identities = 1154/1778 (65%), Gaps = 47/1778 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || | |||||| || || |||||||| ||| Sbjct 88905 CCACAGCACATGATCATGCGTGTTGCTGTTGGTATCTGGGGAGATGATATTGAGAGAGTT 88846 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || |||||| | | |||| |||||| | || || || ||| Sbjct 88845 ATTGAGACGTACAACCTGATGTCGCACAAATTCTTCACGCACGCATCGCCTACACTGTTC 88786 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || |||||||| || || || |||| || ||||| | | | ||||| || Sbjct 88785 AATGCTGGTACGCCCCAGCCTCAGTTGTCGTCGTGCTTCCTCGTCGACATGAAGGATGAC 88726 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| ||||||| || ||| ||||| ||| ||| || Sbjct 88725 AGTATTGAAGGTATCTACGATACTCTCAAGACTTGCGCCATGATCTCCAAGATGGCCGGA 88666 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 ||||| || || || |||| | || | |||| ||| || ||||| || Sbjct 88665 GGTATTGGTCTGAACGTCCACCGTATCCGTGCCACTGGCTCTTACATCGCCGGTACCAAC 88606 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 || ||| | ||||| ||||| |||||||| || || ||| ||| || || || || Sbjct 88605 GGCACGTCAAACGGTATCATTCCCATGCTTCGTGTCTTCAACAACACTGCCCGTTACGTT 88546 Query 111972 AACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 |||| | ||| ||||| || || |||| |||| || |||||||||||| Sbjct 88545 GACCAGGGTGGTAATAAGCGTCCT---GGTGCTTTCGCTATCTACCTGGAGCCATGGCAC 88489 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || ||| || | |||||||| || ||||| ||||| ||| | ||||||| || | Sbjct 88488 GCTGATGTCTTCGAGTTCCTCGACTTGCGAAAGAACCACGGTAAGGAGGAGGTCCGAGCC 88429 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 ||||| |||||| |||||||||||||| || |||||||||||| | |||||| ||| Sbjct 88428 CGCGACCTCTTCCTTGCTCTCTGGATTCCTGACCTCTTCATGAAGCGGGTTGAGAAGAAC 88369 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAG 112205 ||| | ||| | ||| | || || || || || || || | || | ||||| Sbjct 88368 GGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCTGACTGCTACGGTGAC 88309 Query 112206 GAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGC 112263 ||||| || || || ||| ||||||||| |||| | | ||| | || ||| || Sbjct 88308 GAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAAGGCC--GCGGCCGCAAGACCATGA 88251 Query 112264 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 ||| | || | ||||| | || || ||| || | || |||||||| || | || | Sbjct 88250 AGGCT-CAGAAGCTGTGGTACGCCATCCTCGAGGCCCAGACCGAGACCGGCAACCCTTTC 88192 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| ||||| || ||||| |||| ||||| || || ||||| |||| ||| Sbjct 88191 ATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCCGC 88132 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 || |||||||| || || || ||| | || | | |||||| |||||| || Sbjct 88131 AGCTCCAACCTGTGCACCGAGATCATCGAGTACTGTGCTCCTGATGAGGTGGCTGTCTGC 88072 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTGATTA 112501 ||||| || || || ||||| || ||||| || | | | |||| | | | | Sbjct 88071 AACCTGGCCTCCATTGCTCTGCCAGCATATGTTGACTACGAAAACAACTGC-TACAACTT 88013 Query 112502 TGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAG 112561 | | |||||||| || || | || ||||| |||| | |||||| Sbjct 88012 CCAGCACCTCCACGAGGTCACCCAGGTCGTTGTTCGCAACCTGAACAAGATCATTGATGT 87953 Query 112562 AAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCT 112621 || |||||||| || || || || ||| ||||| | || |||||| | Sbjct 87952 CAACCACTACCCCGTGAAGGAGGCATACAACAGCAACATGCGACACAGGCCCATTGGTGT 87893 Query 112622 CGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACG 112680 |||||||| ||||| || |||| ||| || | || || | ||||||| ||| | Sbjct 87892 TGGTGTCCAGGGTCTTGCCGATGCCTTC-TTGGCTCTCCGCATGCCATTTGAGTCCCCTG 87834 Query 112681 AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCG 112739 | || | | || | || || ||||| || || ||||| ||| |||| ||| Sbjct 87833 AGGCTCGCCAGCTGAACAAACAGATCTTCGAGACCATCTACCACGCTGCT-TTGACTGCG 87775 Query 112740 AGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 112799 || || | || ||||||| || ||||| | || | ||||| || || | || Sbjct 87774 TCTTGCGACATCGCCAAGGTTGACGGCCCATACCAGACATACGAGGGATCCCCCGTCTCG 87715 Query 112800 CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAC 112859 || || |||||||| ||| ||||||| | || | || | |||||||| Sbjct 87714 CAGGGACAGCTTCAATATGACATGTGGGGCGTCCAGCCTTCTGATCTTTGGGACTGGGAT 87655 Query 112860 GCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 112919 ||| | |||| | ||||||||| | ||| | || ||||| | |||||||| || ||| Sbjct 87654 GCTTTGAAGGCAAAGATCAAGGAGCACGGTATCCGAAACAGCTTGTTGATGGCGCCCATG 87595 Query 112920 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACG 112979 || || || ||||| | || || |||| || || || ||||| || || ||||| | Sbjct 87594 CCTACCGCATCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCT 87535 Query 112980 AACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA---CAAGCATCTC 113036 |||||||| | | || | || || || ||||| | | ||||| | || ||| Sbjct 87534 AACATCTACCAGCGACGTGTGCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTACTC 87475 Query 113037 GTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCTCATGGTG 113093 | ||||| | |||||||||||| ||||| ||| ||||||| | | |||| | Sbjct 87474 AGG---GACCTGACAGAGATTGGTCTGTGGTCTGAGGCTATGAAGAACCGTATCATTGCC 87418 Query 113094 AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTAC 113153 || | |||||| || || || || || || | || || ||| |||||| Sbjct 87417 GAA---GATGGTTCTATCCAGAACATCCCCAGCATCCCGGCCGATATCAAGGCTTTGTAC 87361 Query 113154 CGCACAGTTTGGGAAATC---AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 113210 || || |||||| || ||| || | || | | ||| | || || || ||| Sbjct 87360 AAGACCGTCTGGGAAGTCTCTCAGAGGACGATTG---TGCAGATGTCTGCTGACCGCGGT 87304 Query 113211 CGCTTCATTGATCAAAGTCAAAG--TATGAATCTATTCATG-GAAAGTCCAACGATGTCC 113267 |||||| || | |||| || | | || | |||| | || || |||||| | Sbjct 87303 GCCTTCATCGACC--AGTCGCAGTCTCTCAACATCCACATGCGTGAG-CCCACGATGGGC 87247 Query 113268 AAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 ||| || || |||||| | | | |||||| ||||||||| || || ||||| ||| Sbjct 87246 AAGATCACTAGCATGCACTTCACCGGCTGGAAGCTGGGTCTCAAGACTGGCATGTACTAC 87187 Query 113328 CTCCGATCTAAGGCAAAGGC-GCGCCCAATTCAGTTCA 113364 ||||| || |||| ||| || ||| |||||||||| Sbjct 87186 CTCCGCACTCAGGCGGCGGCAGCACCC-ATTCAGTTCA 87150 >seq88 Length=140259 Score = 116 bits (128), Expect = 5e-21 Identities = 156/214 (73%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 102166 |||||| || || | ||||| || || ||||| |||||||| | || | |||| Sbjct 57411 AGTTCCCTGCATCCGTAAGAAGGCCGACTGGGCCCTGAAGTGGATCACGGACCACGAGTC 57352 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 | ||| ||| |||| || | || || || ||||||||||||||||||| || Sbjct 57351 ---TACCTACGCTCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGG 57295 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 | | ||| | | || | ||||| |||||||| ||| | ||||| ||||| |||||| Sbjct 57294 TGCTTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTC 57235 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||||| ||||||||||||||||| || ||| Sbjct 57234 CAACGAGCTGATCTCTCGTGACGAGGGTCTGCAC 57201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738714342000