Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq14 253 2e-62 seq1 96.9 4e-15 seq51 87.8 2e-12 >seq14 Length=442650 Score = 253 bits (280), Expect = 2e-62 Identities = 1161/1825 (64%), Gaps = 45/1825 (2%) Strand=Plus/Plus Query 109398 CGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATG 109457 ||||| | ||| || || ||||| || || |||||||| |||||| || | || Sbjct 87172 CGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGACCCAGCTTCCAGCCGGTGAAGTG 87231 Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTCTC-CATAAACAAGTTCATCGACTGAGACT 109516 ||| || || ||| | || || ||| | ||| | ||| | ||||| |||| Sbjct 87232 CATGCTAGTGATCTTGCCCATCGTGGG-CTCACGCATGTGGATGTTGAGAGACTGCGACT 87290 Query 109517 GATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCC 109576 | |||||||| ||| || ||||| | ||| | | || | | || | ||||| Sbjct 87291 GGTCGATGAAGGCACCGCGGTCAGCAGACATCTGCACAATCGTCCTCTGAGAGACTTCCC 87350 Query 109577 AGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGC 109636 |||| |||||||||||| ||||||||| | || ||| |||||| || ||||| Sbjct 87351 AGACGGTCTTGTACAAAGCCTTGATATCGGCCGGGATGCTGGGGATGTTCTGGATAGA-- 87408 Query 109637 CACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGA 109693 |||| | | | |||| | | |||||| | | ||||| ||||| | || | | | Sbjct 87409 -ACCATCTTCGGCAATGATACGGTTCTTCATAGCCTCAGACCACAGACCAATCTCTGTCA 87467 Query 109694 GATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGT 109753 | || | || |||||| || || || |||||||| ||||| ||| Sbjct 87468 GGTCCCTGAGTAGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGT 87527 Query 109754 AGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAG 109813 ||||||||| ||||| || ||||| ||||| |||||||| || || || | ||||| | Sbjct 87528 AGATGTTAGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATG 87587 Query 109814 CTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCAC 109873 | || |||||||| ||||| | | |||||||||| ||| | | ||| | | | Sbjct 87588 CGGTAGGCATGGGCGCCATCAACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGCCT 87647 Query 109874 GCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTT 109933 || || ||||| || || || || | | || | ||||||| || || Sbjct 87648 TCAAAGCATCCCAGTCCCAAAGATCAGAA------GGCTGGACGCCCCACATGTCATATT 87701 Query 109934 GAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGG 109993 |||| |||| | | || || |||| | | ||| ||| | || ||||||| || Sbjct 87702 GAAGCTGTCCCTGCGAGACGGGGGATCCCTCGTATGTCTGGTATGGGCCGTCAACCTTGG 87761 Query 109994 CCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCA 110053 | | ||| | || || | || || || || || ||||| || || || |||| Sbjct 87762 CGATGTCGCAAGACGCAGTCAAAGCAGCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCA 87821 Query 110054 TGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGAATAAACACATCCGCT 110109 |||||| ||| | || || || | || | ||||| |||| || Sbjct 87822 GCTGGCGAGCCTCAGGGGACTCAAATGGCATGCGGAGAGCCAAGAAGG----CATCGGCA 87877 Query 110110 AGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC-GTCGAGCAGTTTC 110168 |||||||| ||||| | ||||||||| | || |||||| | || | ||| Sbjct 87878 AGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGTTGCTGTTGTATGCCTCCTTC 87937 Query 110169 TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT 110228 |||||||| |||| || |||| | || || || || || |||| Sbjct 87938 -ACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGAACAACGACCTGGGTGAC 87996 Query 110229 TTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGC 110288 || ||||| | | | | | | | || | || | | |||||| || ||||| Sbjct 87997 CTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCGTAGTCAACATATGCTGGCAGAGC 88056 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 ||| || || || ||||| |||| ||| || | ||| || | || || || Sbjct 88057 AATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGT 88116 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 |||| |||||| || ||| |||| ||||||||| || ||| |||||| || Sbjct 88117 GCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGC 88176 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 |||||| ||||||||| | ||| | || || || ||||| | || ||| ||||| | ||| Sbjct 88177 ATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCA 88236 Query 110469 TA-CATCGGCGGCGG---GGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524 | | || | | | || | ||||| ||| ||||| ||||||||| || Sbjct 88237 CAGCTTCTGAGCCTTCATGGTC--TTGCGGCCGCGG--CCTTCTCTCTCGTACTTCTCGT 88292 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGA 110584 ||| |||| || || | ||||| |||| ||| || || || ||| || | Sbjct 88293 ACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACA 88352 Query 110585 AGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCG 110644 ||||| ||| | || || |||||||| ||||||||| |||||||||||||| | | Sbjct 88353 TGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGAG 88412 Query 110645 CCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAA 110704 | ||| ||||| ||| || |||| || | ||| ||||| || | || | | Sbjct 88413 CAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAGGA 88472 Query 110705 AGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---AC 110761 | || | || ||| | ||||||||| || || |||| ||||| | || ||| | Sbjct 88473 ACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTAT 88532 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 ||| |||||| ||| || || || ||| |||||||| | ||||| ||||| || | Sbjct 88533 TACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATAC 88592 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | | || || || ||||| || || | ||||||| || ||||| | Sbjct 88593 CGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGACGT 88652 Query 110882 GCATACCAATACCACCCGCCCACTTACTAAT--TTGTGCACACTCTGTGAGTGTACCATA 110939 || ||||||||| || ||| ||| || | | ||| | ||| |||| ||| | || Sbjct 88653 TCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCA-AGTCT-TGAGAGTATCGTA 88710 Query 110940 AATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACG 110999 ||||| ||||| || |||| || | | || ||||| || |||| |||||| | Sbjct 88711 GATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTG 88770 Query 111000 AGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTT 111059 ||||| || |||||||| |||||||| | || || |||| | || |||||| Sbjct 88771 GGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAG 88830 Query 111060 GTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCAT 111119 |||||| || || | | | ||| | || ||||||| ||||| ||||| Sbjct 88831 GTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCAT 88890 Query 111120 GAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCT---GAAGGTAACTCTT 111176 || ||| | || ||| ||||| | || ||||| | ||| | ||||| | Sbjct 88891 GATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGA---GCTTGAGGAGGTATGACCG 88947 Query 111177 CTCTAGGGTCTTGAGACCAAAGTAT 111201 ||| | |||||||| || |||||| Sbjct 88948 CTCCAAGGTCTTGAAGCCGAAGTAT 88972 >seq1 Length=1056303 Score = 96.9 bits (106), Expect = 4e-15 Identities = 203/300 (68%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742 |||||||||||||||||||| ||||| || || ||| ||| || || ||| || Sbjct 512239 GCGTCAATCTCATCGATGAAGACGATGCAAGGCGAGTTCTTACGCGCTTGGGTGAACAGG 512298 Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA-GAACA 11801 ||||| || | | || || ||||| || ||||| || ||||| | | || ||| Sbjct 512299 TCACGCACTCTCGAAGCACCGACACCGACAAACATTTCCACGAACTCGGAACCACTGACA 512358 Query 11802 CTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861 ||||| ||| || ||| || |||||||| |||| || || | |||||||| || Sbjct 512359 CTGAA-GAAAGGTACACCCGATTCACCAGCCGTGGCCTTTGCAAGCAATGTCTTACCAGT 512417 Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCG 11921 ||| || | ||||| | || ||||| || || ||||| || || | | | || Sbjct 512418 ACCGGGAGGACCAGACAAAATTGCGCCGCGAGGAATCTTTGCGCCCAGCCTCTGGAATCG 512477 Query 11922 CTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACC 11981 |||||||| ||| | |||| || | ||| || || ||||||| ||| ||||| Sbjct 512478 CTCAGGCTGCTTCAAGAAGGAGACGAATTCCATAATCTCGACCTTGGCTTCGTCCATACC 512537 >seq51 Length=213229 Score = 87.8 bits (96), Expect = 2e-12 Identities = 187/275 (68%), Gaps = 12/275 (4%) Strand=Plus/Minus Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 |||||| || || || || || || || ||||| ||| | ||||| |||| | | Sbjct 164317 GAAAAGATCTCGGACCCGTTTGGCACCGACACCGACGTAGATCTCGTCGAATTCACTTCC 164258 Query 11796 AGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 ||| | | ||| ||| ||||| | |||||||||| || || ||||| || || | Sbjct 164257 AGACATATAGAA-GAACGGAACGCCGGCTTCACCAGCGACTGCGCGTGCGAGCAGGGTTT 164199 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAA 11914 |||| |||||||| | || |||| ||| | || || | ||| ||||| |||| Sbjct 164198 TACCGGTACCAGGAGGGCCGACGAGGAGGACACCTTTCGGCAGCTT---ACCAC--CCAA 164144 Query 11915 AGTAGCGC-----TCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | | || || ||||| ||||| || || || |||| ||||||||||||||| Sbjct 164143 GGTCGAGAACTTGTCTGGGTTCTTCAGGAACTCAACGATTTCCTGAAGTTCCTCCTTGGC 164084 Query 11970 GGAGTCGATACCCTCAACATCGGTGAAACGAGTCT 12004 ||| || | |||||||| ||||||| || Sbjct 164083 CTCATCGCATCCATGAACATCGGCAAAACGAGCCT 164049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972502955000