Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq80 111 1e-19
seq4 107 1e-18
seq5 82.4 5e-11
>seq80
Length=149332
Score = 111 bits (122), Expect = 1e-19
Identities = 156/217 (72%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| || | ||||| ||||| || ||||| ||||| ||||| || ||| | || | ||
Sbjct 52897 CAACACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTC 52838
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| ||||| || ||||| || || || || |||||||| | || | |||||||||||
Sbjct 52837 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 52778
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944
|||||| ||||| || | ||||| || || ||| || || | ||| |
Sbjct 52777 CTGAATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGA 52722
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||| || |||||||| ||||| || |||||||||||
Sbjct 52721 TGGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 52685
>seq4
Length=784365
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| || ||||| ||||| ||||| || ||| | || | || || |||||
Sbjct 47189 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTG 47248
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
||||||||||| || || || |||||||| | || | ||||||||||| ||||||
Sbjct 47249 CTTTCCGGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTT 47308
Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957
|||||| | || | || | ||| || |||| ||| ||||| || || ||
Sbjct 47309 GGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 47368
Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981
||| ||||| || |||||||||||
Sbjct 47369 GAGGGTCTTGACGAAGATCTGCAT 47392
Score = 98.7 bits (108), Expect = 6e-16
Identities = 152/215 (71%), Gaps = 8/215 (4%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||| | || || ||||||||||| ||||| || || | || | || ||
Sbjct 46955 AACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCGTCCTC 47014
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||| ||||||||||| || || || |||||||| | || | |||||||||||
Sbjct 47015 GAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 47074
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947
||||| ||||| || | ||||| || || ||| || || | || ||||
Sbjct 47075 GATCTTGGACTTGAC--AT--TGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGG 47130
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || ||||| ||||| |||||||| ||||||
Sbjct 47131 TCTTGCCAGTGAGGGTCTTGACAAAGATTTGCATA 47165
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| || || ||||| || || | || |||| |||
Sbjct 46728 ACCAAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAGCGTCCGGCCATCTTCC 46787
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| ||||| || || || || || ||||||||| | || | |||||||||||
Sbjct 46788 AACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGG 46847
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| || ||| | || | || || ||| || || | ||||| ||||||
Sbjct 46848 ATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGACTCCACCTCTAGTGTTATCGTTTTT 46907
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| | ||||| || ||||||||||||
Sbjct 46908 CCCGTCAATGTCTTGACGAAGATCTGCATA 46937
>seq5
Length=773751
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/184 (71%), Gaps = 8/184 (4%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| || ||| | || |||| || ||||| || ||||| || ||
Sbjct 717619 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 717560
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
| ||| |||||||| | || | ||||||||||| ||||| ||||| || |
Sbjct 717559 AATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT--T 717504
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || || ||| || || | ||| ||||| || ||||| || ||||||||
Sbjct 717503 GTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 717444
Query 34970 AAAG 34973
|||
Sbjct 717443 GAAG 717440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324631720675800
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