Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq2 138 9e-28
>seq2
Length=950389
Score = 138 bits (152), Expect = 9e-28
Identities = 273/400 (68%), Gaps = 8/400 (2%)
Strand=Plus/Minus
Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044
|||||| ||||| | ||||| || || || || || ||||| ||||||
Sbjct 623842 CACGTAGAACTGCGCAAACATG---TGACAAGGCGGCAGCGCCATCTTCTTCAAGTCGGC 623786
Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30104
||||||||| |||| || ||||||||| | ||| | ||||| ||| | || ||
Sbjct 623785 GGGGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTGTGGAC 623726
Query 30105 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30164
| | | |||||| || || ||| |||| |||||| | | ||| ||||||
Sbjct 623725 GACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCGACGTACTC 623666
Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224
|| ||||| || | |||||||||||||||||| || |||||||| || | || | |||
Sbjct 623665 GGCGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGGTG 623606
Query 30225 CTCGAAGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283
||| |||| | |||| | || || | || |||||| ||||||||||||| || |
Sbjct 623605 GCCGA-GCCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGC 623547
Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343
||| ||| || ||| || || | || ||||||||||| || ||||| | |
Sbjct 623546 CCTGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGGAGCTCGGCGA 623487
Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
|||||| ||||| | ||||||||| ||||||||
Sbjct 623486 GCACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGG 623447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408615234487175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |