Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq14 338 1e-87 seq88 152 1e-31 >seq14 Length=442650 Score = 338 bits (374), Expect = 1e-87 Identities = 1018/1549 (66%), Gaps = 41/1549 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| || ||||| |||||| ||||| | | | |||||| | ||| | | || Sbjct 87274 GTTGAGAGACTGCGACTGGTCGATGAAGGCACCGCGGTCAGCAGACATCTGCACAATCGT 87333 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 ||||| |||| ||||| ||||||||| | | | |||| || | |||| || ||| Sbjct 87334 CCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCGGGATGCTGGG 87393 Query 212816 GATGTTCTGCACAGACCCC-CTGTGT--ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 ||||||||| | ||| || || | ||| | | | | ||| |||| ||| Sbjct 87394 GATGTTCTGGATAGAACCATCTTCGGCAATGATACGGTTCTT---CATAGCCTCAGACCA 87450 Query 212873 GAGGCCCCTGGTCTC-CAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 || || | ||| |||| | ||| || |||||||| | |||||| || || | Sbjct 87451 CAGACCAATC-TCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACCTGGAACTCGCCAG 87509 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 ||||| | | |||||| | ||| || ||||| ||||||| || ||||||||| |||| Sbjct 87510 CAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCCA 87569 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 ||||||| | ||| || || |||||||| |||| || | ||||| | | |||| Sbjct 87570 GAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTGTTTCGGATACCGT 87629 Query 213052 GCTCGCCGATGA--GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109 |||| ||| | | | |||| |||||||||| |||| ||| Sbjct 87630 GCTCCTTGATCTTTGCCTTCAAAGCAT--CCCAGTCCCAAAGATCAGA-AGG-------- 87678 Query 213110 CTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTC-ACGGGGCTGCCCTGGTAAG 213168 || ||| |||||||||| | || ||| || | ||| |||||| |||| ||| | Sbjct 87679 CTGGACGCCCCACATGTCATATTG-AAGCTGTCCCTGCGAGACGGGGGATCCCTCGTATG 87737 Query 213169 AGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGA 213228 ||| ||||| | ||||||| | ||||| ||||| || ||||||| ||||| Sbjct 87738 TCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGTAGA 87797 Query 213229 TGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCA 213288 |||| || || |||| |||| |||| ||||| |||||| || ||||| | Sbjct 87798 TGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGCATGCGGA 87857 Query 213289 TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348 ||| |||| || || |||||||| || | || ||||| ||||||| || || Sbjct 87858 GAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGT 87917 Query 213349 TAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGC 213408 | ||| | ||||| || |||||| |||| || ||||||||||| ||||||| Sbjct 87918 TGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGC 87977 Query 213409 GGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCT 213468 | | || | |||||| | | |||| || | ||| | || | ||| | Sbjct 87978 GAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGTTGTTTTCGTAGT 88037 Query 213469 GCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTG 213528 ||| | | ||||| || ||| |||||||||||| || |||||||| | || | Sbjct 88038 CAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCAC 88097 Query 213529 TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGT 213588 |||||| ||||||||||||||||||||| || |||||||| |||||||||| ||| Sbjct 88098 AGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGG- 88156 Query 213589 TTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 ||| ||||| | ||| | |||||||||||||||| | ||| |||||||| |||| Sbjct 88157 TTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGG 88216 Query 213648 GACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGC 213707 | | | || || | ||| || | | ||||| | | || | || ||| | Sbjct 88217 GCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCA----TGGTCTTGCGGCCGCGGCC 88272 Query 213708 GTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTC 213765 | | |||||||| ||||| || | | ||| |||| || || | | | | || | Sbjct 88273 TTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAG-CAAGGC 88331 Query 213766 CCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATG 213824 | || || ||| ||||||||| ||||||| ||| || |||| || | || |||| Sbjct 88332 CAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTC-AACCCGCTTCATG 88390 Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884 || ||||| || | ||| || || ||| ||||| | || | ||| ||| || Sbjct 88391 AAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCG 88450 Query 213885 GAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944 ||| || |||| || || || || |||| || |||||||| ||||||| |||||| Sbjct 88451 TGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 88510 Query 213945 GCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAG 214001 || || || || | || | || || |||||||| || | ||| |||||||| Sbjct 88511 GCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAG 88570 Query 214002 ATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCG 214061 | || || | ||| | | ||||| ||| |||||||| || || || || ||||| Sbjct 88571 ACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCA 88630 Query 214062 GAGGCCC--TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGG 214119 | ||| | | | || | | ||| || || || ||||| |||||||||||||| Sbjct 88631 GTGGCACGGATACGGTGGACGTTCAGA--CCAATACCTCCGGCCATCTTGGAGATCATGG 88688 Query 214120 CGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGA 214179 |||| | | | ||| || ||| || | || |||||||| | | || | | || Sbjct 88689 CGCAAGTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGA 88748 Query 214180 AGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGG 214228 |||| ||| | ||| ||| || || |||| ||||| || || || Sbjct 88749 AGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGG 88797 >seq88 Length=140259 Score = 152 bits (168), Expect = 1e-31 Identities = 344/514 (67%), Gaps = 5/514 (1%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 56898 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 56957 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957 ||||||| ||||||||||| | || || ||| | || ||| | || | | Sbjct 56958 CATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCT-TCTCGTTGCCAAGGGCGACAAGGA 57016 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || ||| |||||||||| | ||| ||| || ||||||||| | || Sbjct 57017 GACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGAC 57076 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| | ||||| || | ||||||||||| || ||||| || | |||| Sbjct 57077 TGCAGGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATCAGTGATGATCT 57136 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 || || || | || ||| ||| | |||||| | | |||| ||| || | Sbjct 57137 TCTCGACACGCGCCTTGCTGGGGCGGTTCCTCAGGTGAGAGA---ACAGCAGGCAAGCGA 57193 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||||| || ||||| || ||| ||| ||||||||||| |||||||||| Sbjct 57194 AGTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCAGGCA 57253 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 | | || | || || |||||||| || | ||||||| || ||||||||| |||| Sbjct 57254 TCAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCT 57313 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 | || || ||||| || || | || || | | || | | ||| | |||||| Sbjct 57314 CAACAGCAGCGAAGGCAACCAGACGCTGAGCGTAGGTAGACTCGTGGTCCGTGATCCACT 57373 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || |||||||| |||||||| |||||| || Sbjct 57374 TCAGGGCCCAGTCGGCCTTCTTACGGATGCAGGG 57407 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| | ||||||| | Sbjct 57548 TCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCAGGGA 57607 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || | | ||| | ||| | ||| ||||| ||||| || ||||| ||||||| Sbjct 57608 TCTGGACCTCGGCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATACCATCGGAAGCAG 57667 Query 48549 CAAAGAAGGCAAGGA 48563 | ||||||||||||| Sbjct 57668 CGAAGAAGGCAAGGA 57682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527269024000