Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq14 235 1e-56
seq88 147 4e-30
>seq14
Length=442650
Score = 235 bits (260), Expect = 1e-56
Identities = 864/1329 (65%), Gaps = 47/1329 (4%)
Strand=Plus/Plus
Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGGGCA 221425
|| ||||| | || ||| || |||| | | ||| | |||||||| |||| |||
Sbjct 87728 CCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCA 87787
Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGAA 221484
||||||||||||||||| |||||| ||||| || || | ||||| || || ||
Sbjct 87788 GCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCAG-CTGGCGAGCCTCAGGGGACTCAAA 87846
Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544
||||| || || | ||| | ||||| || ||||| || || | ||| ||||||||
Sbjct 87847 TGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCT 87906
Query 221545 GTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATT 221604
||||| | ||||| | || || |||||| || |||||| || || | ||
Sbjct 87907 GTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTT 87966
Query 221605 GTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA 221664
||| ||||| || || ||| |||| ||| | || ||| | | | ||
Sbjct 87967 GTTCAGGTTGCGA------AC---AACGACCTGGGTGACCTCGTGGAGGTG---CTGGAA 88014
Query 221665 CTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACA 221724
| | || || || | || ||| | || || |||| | ||||||||| ||
Sbjct 88015 GTTGTAGCAGTTGTTTTCGTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCA 88074
Query 221725 CACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784
|| |||||||| || |||| |||||||| || || |||||| ||
Sbjct 88075 GACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCG 88134
Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844
|||||| ||||||| || || || |||||| ||| || |||||||||||||| ||
Sbjct 88135 GATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 88194
Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCA 221903
|| ||| ||||| ||| ||| | || || || ||| || | |||| || |||
Sbjct 88195 AGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCT-TCTGAGCCTTCA 88253
Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATAC--CCGGTATAGAGCATGTCAAACT 221960
||| | | | || ||| ||| | || ||| | ||| ||||| | | ||||
Sbjct 88254 TGGTCTTGCGGCC-GCGGCCT---TCTCTCTCGTACTTCTCGTACAGAGCCT--CGAACT 88307
Query 221961 TTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCT 222020
|||||||| || | ||||| || ||| | ||| ||||| || ||||||
Sbjct 88308 CGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGC 88367
Query 222021 TGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC 222080
||| | | |||| || |||||||||||| || ||||| || || | ||||| || |
Sbjct 88368 CGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGC 88427
Query 222081 TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAG 222140
|| || ||||||| |||| ||| || | || || | ||||| || | ||||
Sbjct 88428 GGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAG 88487
Query 222141 CGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCA 222200
||||||| |||||||| |||| || | ||| || || ||||| || |||||||| | ||
Sbjct 88488 CGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTATTACCACCCTGGT-CA 88546
Query 222201 CCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCG 222259
| | ||| | |||||||| ||||| | || | | ||||| || |||
Sbjct 88547 ACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCG 88606
Query 222260 TTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG-CAGACATGCCGATA 222316
||||| || ||||| | || ||| | || ||| ||| | || || |||
Sbjct 88607 TTGGTACCGGCGATGTAAGAGCCAGTGGCAC---GGATACGGTGGACGTTCAGACCAATA 88663
Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376
|| ||||| || |||||||||||||| |||||||||| || ||| || || |||
Sbjct 88664 CCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTAGATACCTTCAATA 88723
Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436
||| ||||| | || | || || || ||||||| ||||| | || | || ||
Sbjct 88724 CTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCA 88783
Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496
|| ||||| || || ||||| || ||| | |||||||| | |||||||||
Sbjct 88784 TTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCA 88843
Query 222497 ACGACTCTGGCGATGT--TGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACT 222554
| ||||| | || | | ||||| | | || || | |||| ||||| ||
Sbjct 88844 ATAACTCTCTCAATATCATCTCCCCAGATACCAACA--GCAACACGCATGATCATGTGCT 88901
Query 222555 GGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTC 222610
| |||| || || ||| || | ||||| ||| ||||| || |||| |||
Sbjct 88902 GTGGCCGTTCGAC--GACTTTGCCATCGAGCT--TGAGGAGGTATGACCGCTCCAAGGTC 88957
Query 222611 TTGAACCCAAAGTAGTTGA-GGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC 222669
||||| || ||||| |||| | | ||||||| | | | || | ||| | ||| |||||
Sbjct 88958 TTGAAGCCGAAGTA-TTGATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTCGAGCTC 89016
Query 222670 CGACTTGTG 222678
||||||
Sbjct 89017 GTCCTTGTG 89025
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | ||||| | | |||||| | |||||| ||| | ||
Sbjct 87487 GTTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGG 87546
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||||||||| ||||| | ||| ||||| |||||||| ||||
Sbjct 87547 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCAT 87606
Query 221236 CAGCAGACTGTTGCG 221250
|| || ||||| ||
Sbjct 87607 CAACAAGCTGTTTCG 87621
>seq88
Length=140259
Score = 147 bits (162), Expect = 4e-30
Identities = 343/519 (66%), Gaps = 17/519 (3%)
Strand=Plus/Minus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTAC 25868
||| ||||| | |||||| |||||| |||||||||||| ||| ||| ||||
Sbjct 57407 CCCTGCATCCGTAAGAAGGCCGACTGGGCCCTGAAGTGGATCACGGACCACGAGT-CTAC 57349
Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928
| | |||| ||||| ||||| |||||||| ||||| ||||| ||||||||| | ||
Sbjct 57348 CTACGCTCAGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTT 57289
Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988
|| ||||||||||||| ||| || || ||||| || ||| ||| ||||||||
Sbjct 57288 CGCCTCCATCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGA 57229
Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048
||| ||| | ||||||||||| |||| || || || |||||||| | | | ||
Sbjct 57228 GCTGATCTCTCGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTGCTGTTCTC---TCA 57172
Query 26049 CTTGCTCCACAAACCTTCTC----AAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGG 26104
| || | |||| | | | | | ||| | | ||||||| || || || |
Sbjct 57171 CCTG----AGGAACCGCCCCAGCAAGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCG 57116
Query 26105 AGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACA 26164
|| ||||||||||| | ||||||||| ||
Sbjct 57115 TCATTGAGAAGGAGTTCTTGACCGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCA 57056
Query 26165 GACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGT-GCCAGCTGGGACT 26222
|| |||| || ||||| |||| |||||||||| ||| | ||| ||| || ||
Sbjct 57055 ACCTGATGAAGCAGTACATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCC--CTTGGCAA 56998
Query 26223 CGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGG 26282
|| | |||||| | | ||||| |||||||| ||||| ||||| || | | ||
Sbjct 56997 CGAGAAGGTCTACAAGTCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGG 56938
Query 26283 GAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||||||||||||| || ||| | ||||| ||||| ||
Sbjct 56937 CAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 56899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928839284984000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |