Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq14 163 8e-35 seq26 109 2e-18 seq47 107 6e-18 >seq14 Length=442650 Score = 163 bits (180), Expect = 8e-35 Identities = 494/756 (65%), Gaps = 13/756 (2%) Strand=Plus/Plus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 ||||| ||||||||| || || |||||| || | ||||||||||| || | | Sbjct 88109 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGG 88168 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || ||||||||||| || ||| | ||| | || ||||| |||| || || || || Sbjct 88169 TTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG 88228 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| || | | || || || |||| | | |||||| ||| || ||| Sbjct 88229 GCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTCTCGTACTTC 88288 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 ||||| | | | || |||||||| || ||| || |||||||||| | |||| Sbjct 88289 TCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGG 88348 Query 155880 CAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCC 155936 || | || | ||| || || | | | |||| ||| || | ||| | Sbjct 88349 CACATGAGGGTCCAGTCGCCGTTCTTCTCAA---CCCGCTTCATGAAGAGGTCAGGAATC 88405 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTGATTCTTCCGTAG 155995 || | |||| ||| ||||| | || | ||| ||||| | ||||| ||||| || | Sbjct 88406 CAGAGAGCAAGGAAGAGGTCGCGGGC-TCGGACCTCCTCCTTACCGTGGTTCTTTCGCAA 88464 Query 155996 CTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATT 156055 || | ||| || | ||||| || ||||||||| || ||||| ||| |||| Sbjct 88465 GTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGG 88524 Query 156056 CCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGG 156112 | ||| |||||||| || || || || ||||| || |||||||||| ||||| || Sbjct 88525 ACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGG 88584 Query 156113 AATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATT 156172 ||| ||||| || || ||||| ||||| ||| || | || |||| | || | | Sbjct 88585 AATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACG 88644 Query 156173 ATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAG 156231 || | | || |||||||| || | |||| || || || ||||| ||| | || Sbjct 88645 GTGGACGTTCAGACCAATACCTCCGG-CCATCTTGGAGATCATGGCGCAAGTCTTGAGAG 88703 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATT 156291 ||| | | |||||||||||| ||||| | ||| | || ||||||| || | Sbjct 88704 TATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACT 88763 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 |||| | || || ||||| ||||| |||||||| | ||| || | || | || | | Sbjct 88764 GAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCG 88823 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGAT 156387 |||| | ||| ||||| ||| |||||| || Sbjct 88824 ACATCAGGTTGTACGTCTCAATAACTCTCTCAATAT 88859 >seq26 Length=307012 Score = 109 bits (120), Expect = 2e-18 Identities = 182/260 (70%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 251402 AGGCG--ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATA 251459 ||||| || |||||||| | | ||| | ||||| ||| | ||||| || | ||| | Sbjct 124158 AGGCGTCATGAGACCACAAATTTCACAAATGTGGACTCTGAACGCATCCGAGACTTCAAA 124099 Query 251460 TAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTC 251519 | || |||| ||| | |||||||| | |||||||||||||||||||||||| Sbjct 124098 CAAGCGCTCCTTTAGGAATGCCGCCGCACCGTGAGCAATCATACAATCACGCTCCATTTC 124039 Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC 251579 ||||||||||||||||| || || || | ||||||| | ||||| || || || | | Sbjct 124038 TCCGAAACGAAGACCACCGTCACGCGCACGACCCTCGACCGGCTGCCGCGT--CATGATC 123981 Query 251580 CATA--GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGG 251637 || ||||| | ||| || ||| || | ||||| || |||||||||| Sbjct 123980 TGTACGGGACCACGAGCACGGGCGTGAATCTTGTCGTCCACCATGTGACGGAGACGCTGG 123921 Query 251638 TAGAATGCGGGACCGATGAA 251657 ||| | | |||||| | ||| Sbjct 123920 TAGTACGTGGGACCAAAGAA 123901 Score = 91.5 bits (100), Expect = 4e-13 Identities = 113/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || ||||| |||||||| ||||| || ||||| |||||||| |||||||| | | Sbjct 123719 TGAGCGATTGTCATACGCGATGGAATGGCGTGGGGGTTGATGATAATGTCGGGCGTGACA 123660 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAA--TAA-TGTTTCCAATAGTTCCCTTT 251955 || || |||||| ||||| || ||||| | ||| || |||||||| ||||| Sbjct 123659 CCCTCGCGAGTGAACGGCATGTC---TTCCTGACGGTAAGTGACACCAATAGTGCCCTTC 123603 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || ||||||||||| |||||| |||||||| Sbjct 123602 TGACCGTGACGAGATGCGAACTTGTCACCAAT 123571 >seq47 Length=232334 Score = 107 bits (118), Expect = 6e-18 Identities = 188/274 (69%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652 || |||||||| ||||| ||| || || || || || |||||||| | ||| | ||| Sbjct 70145 CGGCGCTGAATGTAACCTGTTTCAGCGGTCTTGACTGCAGTATCAATCAAACCTTCTCGA 70086 Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 ||| |||| || |||||||| | || ||| || || | | | ||| | || Sbjct 70085 CCAGCCATGGCGTGGAAGAAGAATTCGGTGGGTGTCAGACCACGGAGGTAAGAGTTTTCG 70026 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 ||||| ||||| || || || || | || |||||| ||||| ||||| || | || | Sbjct 70025 ACGAATCCACGAGCTTCCGGTGAGTAATCATCCTTGGTGAAGTGAGGCAGAGTTCGGTAC 69966 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832 | ||||| | || ||||||||||| ||||| ||| || |||| || | ||||| Sbjct 69965 TTGAAGCCGAAGGGAATACGCTTTCCCTCAACAACCTGTTGACCCACTAGCGCAGTCATC 69906 Query 302833 TGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 ||||| || || | ||||||||| |||| Sbjct 69905 TGCGAGATGTTGATGGACGAGCCCTTGGAACCAG 69872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808642610075