Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 168 8e-36 seq27 167 3e-35 seq14 143 3e-28 seq63 127 2e-23 seq88 123 3e-22 seq37 120 4e-21 seq36 104 3e-16 seq17 104 3e-16 seq139 86.0 8e-11 >seq3 Length=867841 Score = 168 bits (186), Expect = 8e-36 Identities = 258/368 (70%), Gaps = 6/368 (2%) Strand=Plus/Minus Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180 ||||||||||| |||||||| ||||| ||||| | ||| |||| |||||||||||| Sbjct 116532 GTCGGCTGCATAGTCGACGGCTGCCCGCCCGGCATGGCCCTGACCGAAGCCGACATCCAG 116473 Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240 || || || | ||||| || |||||| ||| | |||| || ||||| ||| Sbjct 116472 CCCCAAATGACGAGACGCCGCCCTGGCCAGTCCGCCATCACCACCCCTCGCAATGAGAAA 116413 Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300 || ||||| |||||||| ||||| ||| |||| | ||||| ||| | || | ||| Sbjct 116412 GACCGCGTTCAGATCCAGTCCGGCACCGAGTTCGGCGTGACGCTGGGCACACCAATTGGC 116353 Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCC------CGTCGACTATTCCGACATGTGCAAG 18354 | | || ||| ||||||||||| | || | | ||| |||| || | Sbjct 116352 ATGCTAGTCATGAACGAGGACCAGCGGCCTAAGGACTACGGCAACTCCACCATGGACATG 116293 Query 18355 GTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCG 18414 | || || || || |||||||||| |||||| ||| ||||||||| ||||||| ||| Sbjct 116292 TTCCCCCGCCCTTCGCACGCCGACTGGACCTACCTGGAGAAGTACGGCGTCAAGGCCTCG 116233 Query 18415 TCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTC 18474 || ||||| ||| || || || |||||| || || || || |||||||| || Sbjct 116232 TCCGGCGGCGGCAGGAGCAGCGCGCGAGAGACCATCGGACGGGTGGCTGCCGGCGCCATC 116173 Query 18475 GCCGAGAA 18482 |||||||| Sbjct 116172 GCCGAGAA 116165 Score = 141 bits (156), Expect = 1e-27 Identities = 127/158 (80%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 19046 GGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGA 19105 ||||||||||||||| || || || ||||| || | ||| | ||||||||||| Sbjct 115930 GGACAGCATCGGCGGGACCGTCACCTGCGTCATCAAGAATGCGCCCTCGGGCCTCGGCGA 115871 Query 19106 GCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165 ||||||||| |||||||| |||||| |||||| |||||||||||||| ||||| ||||| Sbjct 115870 GCCGTGCTTCGACAAGATGGAGGCCATGCTCGCGCACGCCATGCTGTCCATCCCCGCCAC 115811 Query 19166 CAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 |||||| |||||||| ||| ||| || |||| |||| Sbjct 115810 CAAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 115773 >seq27 Length=305726 Score = 167 bits (184), Expect = 3e-35 Identities = 264/374 (71%), Gaps = 6/374 (2%) Strand=Plus/Minus Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925 |||||| |||||||| || || | | | || |||||||| |||||||| || ||| Sbjct 224611 GACGGCAACATGCCCCACGTCATCATCTCAGGCATGCCCGGCATCGGCAAGACGACCAGC 224552 Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985 | || || ||||| ||| |||||| || | | |||||||| || |||||| Sbjct 224551 GTGCTCTGCCTCGCGCGACAACTCCTGGGCGACGCATACAAGGAGGCCGTACTGGAACTC 224492 Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045 |||||||| || |||||||| | ||||| ||||| || ||||||| | |||| Sbjct 224491 AACGCGTCCGATGAGCGCGGAATAGACGTGGTGCGGAACCGCATCAAGGGCTTCGCCCAG 224432 Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105 |||| | || ||||| |||||||| |||||| | |||||||||||||||| ||| || Sbjct 224431 AAGAAGGTCACGCTGCCTCCCGGACGGCACAAGATTGTCATCCTCGACGAGGCGGACAGC 224372 Query 1574106 CTCACG-TCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGAC 1574164 | ||| |||| || |||||||| || || || ||||| | || | || ||||| Sbjct 224371 ATGACGAGCGGC-GCGCAGCAGGCTTTGAGGCGGACTATGGAGATCTACTCGAATACGAC 224313 Query 1574165 GCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGC-- 1574222 || || ||| | ||||||||| |||| | | |||| ||| | | | |||||| Sbjct 224312 TCGGTTCGCCTTTGCGTGCAACCAGTCGAACAAGATCATTGAGCCGTTGC--AGTCGCGA 224255 Query 1574223 TGCGCCATTCTGCG 1574236 || || || ||||| Sbjct 224254 TGTGCGATCCTGCG 224241 >seq14 Length=442650 Score = 143 bits (158), Expect = 3e-28 Identities = 324/489 (66%), Gaps = 15/489 (3%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| || || |||| ||| ||||| || |||||||| | || ||||| || Sbjct 88540 CTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGA 88599 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||||||| || || | ||| | ||| | ||| || | ||| || | || Sbjct 88600 CGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGACC 88659 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || |||||| ||||||||| | ||||| ||||| || |||||||| || || Sbjct 88660 AATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTAGATACCTTC 88719 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| ||||||||||| || || || | ||| || Sbjct 88720 AATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACC 88779 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || || |||| || ||||| || | ||||||| || ||| || Sbjct 88780 AGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGT 88839 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | | || | | | | |||| ||| | || || | || || Sbjct 88840 CTCAATAACTCTCTCAATATCATC-TCCCC--------------AGATACCAACAGCAAC 88884 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| ||| ||||| |||||||| ||| | |||| ||||| || Sbjct 88885 ACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGA 88944 Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGC 1630544 ||| || |||| ||| ||| ||||| | || | || || ||||| | ||||| Sbjct 88945 CCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGGTCATATACAATGGC 89004 Query 1630545 GGCGTCGAG 1630553 | |||||| Sbjct 89005 AGAGTCGAG 89013 Score = 122 bits (134), Expect = 1e-21 Identities = 268/408 (66%), Gaps = 2/408 (0%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| || |||||||||||||||||||| | || | || |||||||||| ||||||| Sbjct 88101 ACTCGATGATCTCGGTGCACAGGTTGGAGCTGCG-GATGGTTCCCAGGTTCTTCTGGTTG 88159 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | | ||||| ||| ||||||| ||||||| | || |||||||||| |||| ||| Sbjct 88160 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCC 88219 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340 ||| |||||| |||| | || | || || | | || ||||||| | Sbjct 88220 TCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTC 88279 Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400 || || | | |||||||| || ||||| || | Sbjct 88280 TCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCAC 88339 Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460 ||| || || | ||| | ||||||||| || | | || ||| ||||||||| Sbjct 88340 TCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCA 88399 Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520 |||| || || ||||||||||| || ||| ||||||||| |||||||||||| Sbjct 88400 GGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTT 88459 Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 | |||||| | |||| | || |||||||| |||||||||||| Sbjct 88460 CGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAG 88507 >seq63 Length=186541 Score = 127 bits (140), Expect = 2e-23 Identities = 97/115 (84%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592180 ATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTG 1592239 || || || ||||||||| | ||||||||| | || || ||| | || |||||| | || Sbjct 106410 ATTCTTGCTGCCAACTACATGGACATCAAGGCGCTTCTGGATGTCGGCTGCAAGACAGTT 106469 Query 1592240 GCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct 106470 GCCAACATGATCAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACCTTCAACATCA 106524 >seq88 Length=140259 Score = 123 bits (136), Expect = 3e-22 Identities = 176/245 (72%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 56893 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 56952 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||||| | ||||||| ||| ||| || || | | Sbjct 56953 TTCTCCATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTGCCAAGGGCGACA 57012 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || |||||||| || |||||||||||||| ||| ||| |||||||||||||| Sbjct 57013 AGGAGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGC 57072 Query 868871 AG-CGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || | || || || | |||| ||| ||||| ||||| || ||||||| || ||| Sbjct 57073 AGACTGCA-GGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATCAGTGAT 57131 Query 868930 GATCT 868934 ||||| Sbjct 57132 GATCT 57136 Score = 89.7 bits (98), Expect = 6e-12 Identities = 137/195 (70%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||||| |||||| |||| || || ||||| | |||||||| Sbjct 57207 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCAGGCATCAAACCGCGCTT 57266 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||||| | |||| || ||| ||||| ||||| || || || || Sbjct 57267 CTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAACAGCAGCGAA 57326 Query 869299 GCCGATGAGCCGCTCGGCAAAGGT---GTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 | | | || |||| || |||| ||| || || |||||||||||| || Sbjct 57327 GGCAACCAGACGCTGAGCGTAGGTAGACTCGTGGTCC------GTGATCCACTTCAGGGC 57380 Query 869356 CCAGTCGGCCTTTTT 869370 |||||||||||| || Sbjct 57381 CCAGTCGGCCTTCTT 57395 >seq37 Length=263410 Score = 120 bits (132), Expect = 4e-21 Identities = 197/280 (70%), Gaps = 7/280 (3%) Strand=Plus/Plus Query 1852040 AGGCCGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGC 1852099 ||| ||||||||||| ||| ||||| | ||||||||||| || ||||| || Sbjct 254221 AGGTCGATCTTGGAGTTGGCGTCGCTCGACGACATCTTGCCGCCCTGC---AGGCCGGGG 254277 Query 1852100 ACGAGCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGC 1852159 || | ||||| | | ||| ||||| || || || || ||||| ||| Sbjct 254278 ACCATGGGGTTCATGATGTGCGCGCGCTGGCGGTACCCCAGCTTGGGCAGCCAGTCCTTG 254337 Query 1852160 GCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 1852219 ||| | || | ||||||||||||| ||||| ||||| |||| |||||||||| | Sbjct 254338 GCAGCCGTGAAGAGCTTGCGCTGGTCGACGCCGCCGAACTGCACGTCCACGTCGAGGTAC 254397 Query 1852220 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTT-GCGGTC 1852278 ||||||||||| |||||| || |||||||||| | | |||| ||| ||| || || Sbjct 254398 TGCTCGTCGAGCACCTGCAGGATGGGGTAGAGCAGGCCGGACAGGGGCGCGTTGGCCGT- 254456 Query 1852279 CATCTTGACCACCTGAGCGGCGGCCT--TTTGCGCCGTGC 1852316 | |||||| |||| ||| |||||| || ||| ||||| Sbjct 254457 CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 254496 >seq36 Length=274094 Score = 104 bits (114), Expect = 3e-16 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGA-CGAGGC 344240 || || |||||||| || |||||||||||||||||||| ||||||||| || | || || Sbjct 196601 GTCGCATTCCCCACAGAAACCGTCTACGGCCTCGGCGCGGACGCCACG-CTCACCGCCGC 196659 Query 344241 CGTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300 ||| | |||||| | | ||||||||| ||||| |||||||| |||| |||||||| Sbjct 196660 CGTAAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCGCTCATCGTGCACGT 196719 Query 344301 G 344301 | Sbjct 196720 G 196720 >seq17 Length=381168 Score = 104 bits (114), Expect = 3e-16 Identities = 140/190 (74%), Gaps = 5/190 (3%) Strand=Plus/Plus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||| |||||| || |||||||||||| |||||||||||||| ||||| || | Sbjct 16497 GTCGACGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTCGTGCGGGGCTTCTCAAG 16556 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085 ||||||||||||| | ||| || | | ||||| | | ||||||| || | | || Sbjct 16557 GTAGGCGCGCATGATGATGCAGAGGTCAT--CCGACAGCTTGTCGGACAGAGACTTG-AG 16613 Query 1727086 GC-GTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAA 1727144 | ||||| | || || | | ||| || |||||||| || || || ||||||| || Sbjct 16614 TCTGTCGG-CGTACTCAAGGGCGGTGGCGGGGTCGTGGATGGAGCAGGGGCCAACGACAA 16672 Query 1727145 CCAGCAGCCG 1727154 | ||||| || Sbjct 16673 CAAGCAGGCG 16682 >seq139 Length=75861 Score = 86.0 bits (94), Expect = 8e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1254437 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGA 1254496 |||||||||| ||| || |||| ||||||||||| || ||||||| || ||||| | Sbjct 61481 GGCCTCGGTGGCGACCCGCTCGAAGATGTCGTTGACGAAAGAGTTCAGGATAGACATGGC 61540 Query 1254497 CTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||| || ||||||||| ||||||||||| || Sbjct 61541 ACGGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 61582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107100219275575