Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3 168 8e-36
seq27 167 3e-35
seq14 143 3e-28
seq63 127 2e-23
seq88 123 3e-22
seq37 120 4e-21
seq36 104 3e-16
seq17 104 3e-16
seq139 86.0 8e-11
>seq3
Length=867841
Score = 168 bits (186), Expect = 8e-36
Identities = 258/368 (70%), Gaps = 6/368 (2%)
Strand=Plus/Minus
Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180
||||||||||| |||||||| ||||| ||||| | ||| |||| ||||||||||||
Sbjct 116532 GTCGGCTGCATAGTCGACGGCTGCCCGCCCGGCATGGCCCTGACCGAAGCCGACATCCAG 116473
Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240
|| || || | ||||| || |||||| ||| | |||| || ||||| |||
Sbjct 116472 CCCCAAATGACGAGACGCCGCCCTGGCCAGTCCGCCATCACCACCCCTCGCAATGAGAAA 116413
Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGC 18300
|| ||||| |||||||| ||||| ||| |||| | ||||| ||| | || | |||
Sbjct 116412 GACCGCGTTCAGATCCAGTCCGGCACCGAGTTCGGCGTGACGCTGGGCACACCAATTGGC 116353
Query 18301 CTCTTTGTGGCCAACCGCGACCAGCGGCC------CGTCGACTATTCCGACATGTGCAAG 18354
| | || ||| ||||||||||| | || | | ||| |||| || |
Sbjct 116352 ATGCTAGTCATGAACGAGGACCAGCGGCCTAAGGACTACGGCAACTCCACCATGGACATG 116293
Query 18355 GTGCCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCG 18414
| || || || || |||||||||| |||||| ||| ||||||||| ||||||| |||
Sbjct 116292 TTCCCCCGCCCTTCGCACGCCGACTGGACCTACCTGGAGAAGTACGGCGTCAAGGCCTCG 116233
Query 18415 TCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTC 18474
|| ||||| ||| || || || |||||| || || || || |||||||| ||
Sbjct 116232 TCCGGCGGCGGCAGGAGCAGCGCGCGAGAGACCATCGGACGGGTGGCTGCCGGCGCCATC 116173
Query 18475 GCCGAGAA 18482
||||||||
Sbjct 116172 GCCGAGAA 116165
Score = 141 bits (156), Expect = 1e-27
Identities = 127/158 (80%), Gaps = 1/158 (1%)
Strand=Plus/Minus
Query 19046 GGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGA 19105
||||||||||||||| || || || ||||| || | ||| | |||||||||||
Sbjct 115930 GGACAGCATCGGCGGGACCGTCACCTGCGTCATCAAGAATGCGCCCTCGGGCCTCGGCGA 115871
Query 19106 GCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165
||||||||| |||||||| |||||| |||||| |||||||||||||| ||||| |||||
Sbjct 115870 GCCGTGCTTCGACAAGATGGAGGCCATGCTCGCGCACGCCATGCTGTCCATCCCCGCCAC 115811
Query 19166 CAAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
|||||| |||||||| ||| ||| || |||| ||||
Sbjct 115810 CAAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 115773
>seq27
Length=305726
Score = 167 bits (184), Expect = 3e-35
Identities = 264/374 (71%), Gaps = 6/374 (2%)
Strand=Plus/Minus
Query 1573866 GACGGCGACATGCCCAACCTCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGC 1573925
|||||| |||||||| || || | | | || |||||||| |||||||| || |||
Sbjct 224611 GACGGCAACATGCCCCACGTCATCATCTCAGGCATGCCCGGCATCGGCAAGACGACCAGC 224552
Query 1573926 ATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 1573985
| || || ||||| ||| |||||| || | | |||||||| || ||||||
Sbjct 224551 GTGCTCTGCCTCGCGCGACAACTCCTGGGCGACGCATACAAGGAGGCCGTACTGGAACTC 224492
Query 1573986 AACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCC 1574045
|||||||| || |||||||| | ||||| ||||| || ||||||| | ||||
Sbjct 224491 AACGCGTCCGATGAGCGCGGAATAGACGTGGTGCGGAACCGCATCAAGGGCTTCGCCCAG 224432
Query 1574046 AAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGC 1574105
|||| | || ||||| |||||||| |||||| | |||||||||||||||| ||| ||
Sbjct 224431 AAGAAGGTCACGCTGCCTCCCGGACGGCACAAGATTGTCATCCTCGACGAGGCGGACAGC 224372
Query 1574106 CTCACG-TCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGAC 1574164
| ||| |||| || |||||||| || || || ||||| | || | || |||||
Sbjct 224371 ATGACGAGCGGC-GCGCAGCAGGCTTTGAGGCGGACTATGGAGATCTACTCGAATACGAC 224313
Query 1574165 GCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGC-- 1574222
|| || ||| | ||||||||| |||| | | |||| ||| | | | ||||||
Sbjct 224312 TCGGTTCGCCTTTGCGTGCAACCAGTCGAACAAGATCATTGAGCCGTTGC--AGTCGCGA 224255
Query 1574223 TGCGCCATTCTGCG 1574236
|| || || |||||
Sbjct 224254 TGTGCGATCCTGCG 224241
>seq14
Length=442650
Score = 143 bits (158), Expect = 3e-28
Identities = 324/489 (66%), Gaps = 15/489 (3%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| || || |||| ||| ||||| || |||||||| | || ||||| ||
Sbjct 88540 CTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGA 88599
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| ||||||||| || || | ||| | ||| | ||| || | ||| || | ||
Sbjct 88600 CGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGACC 88659
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || |||||| ||||||||| | ||||| ||||| || |||||||| || ||
Sbjct 88660 AATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTAGATACCTTC 88719
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| |||||||||| ||||| ||||||||||| || || || | ||| ||
Sbjct 88720 AATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACC 88779
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|| ||||| || || |||| || ||||| || | ||||||| || ||| ||
Sbjct 88780 AGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGT 88839
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
| | || | | | | |||| ||| | || || | || ||
Sbjct 88840 CTCAATAACTCTCTCAATATCATC-TCCCC--------------AGATACCAACAGCAAC 88884
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484
||||||| ||||| ||| ||||| |||||||| ||| | |||| ||||| ||
Sbjct 88885 ACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGA 88944
Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGC 1630544
||| || |||| ||| ||| ||||| | || | || || ||||| | |||||
Sbjct 88945 CCGCTCCAAGGTCTTGAAGCCGAAGTATTGATAGCCGAAGTCTCGGTCATATACAATGGC 89004
Query 1630545 GGCGTCGAG 1630553
| ||||||
Sbjct 89005 AGAGTCGAG 89013
Score = 122 bits (134), Expect = 1e-21
Identities = 268/408 (66%), Gaps = 2/408 (0%)
Strand=Plus/Plus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGG-CCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220
||| || |||||||||||||||||||| | || | || |||||||||| |||||||
Sbjct 88101 ACTCGATGATCTCGGTGCACAGGTTGGAGCTGCG-GATGGTTCCCAGGTTCTTCTGGTTG 88159
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| | ||||| ||| ||||||| ||||||| | || |||||||||| |||| |||
Sbjct 88160 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCC 88219
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340
||| |||||| |||| | || | || || | | || ||||||| |
Sbjct 88220 TCGAGGATGGCGTACCACAGCTTCTGAGCCTTCATGGTCTTGCGGCCGCGGCCTTCTCTC 88279
Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400
|| || | | |||||||| || ||||| || |
Sbjct 88280 TCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCAC 88339
Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460
||| || || | ||| | ||||||||| || | | || ||| |||||||||
Sbjct 88340 TCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCA 88399
Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520
|||| || || ||||||||||| || ||| ||||||||| ||||||||||||
Sbjct 88400 GGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTT 88459
Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568
| |||||| | |||| | || |||||||| ||||||||||||
Sbjct 88460 CGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAG 88507
>seq63
Length=186541
Score = 127 bits (140), Expect = 2e-23
Identities = 97/115 (84%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1592180 ATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTG 1592239
|| || || ||||||||| | ||||||||| | || || ||| | || |||||| | ||
Sbjct 106410 ATTCTTGCTGCCAACTACATGGACATCAAGGCGCTTCTGGATGTCGGCTGCAAGACAGTT 106469
Query 1592240 GCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct 106470 GCCAACATGATCAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACCTTCAACATCA 106524
>seq88
Length=140259
Score = 123 bits (136), Expect = 3e-22
Identities = 176/245 (72%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 56893 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 56952
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| ||| || || | |
Sbjct 56953 TTCTCCATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTGCCAAGGGCGACA 57012
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || |||||||| || |||||||||||||| ||| ||| ||||||||||||||
Sbjct 57013 AGGAGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGC 57072
Query 868871 AG-CGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
|| | || || || | |||| ||| ||||| ||||| || ||||||| || |||
Sbjct 57073 AGACTGCA-GGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATCAGTGAT 57131
Query 868930 GATCT 868934
|||||
Sbjct 57132 GATCT 57136
Score = 89.7 bits (98), Expect = 6e-12
Identities = 137/195 (70%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| ||| ||||| |||||| |||| || || ||||| | ||||||||
Sbjct 57207 ACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGACCAGGCATCAAACCGCGCTT 57266
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| ||||| ||||||| | |||| || ||| ||||| ||||| || || || ||
Sbjct 57267 CTTCAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGATACCCTCAACAGCAGCGAA 57326
Query 869299 GCCGATGAGCCGCTCGGCAAAGGT---GTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355
| | | || |||| || |||| ||| || || |||||||||||| ||
Sbjct 57327 GGCAACCAGACGCTGAGCGTAGGTAGACTCGTGGTCC------GTGATCCACTTCAGGGC 57380
Query 869356 CCAGTCGGCCTTTTT 869370
|||||||||||| ||
Sbjct 57381 CCAGTCGGCCTTCTT 57395
>seq37
Length=263410
Score = 120 bits (132), Expect = 4e-21
Identities = 197/280 (70%), Gaps = 7/280 (3%)
Strand=Plus/Plus
Query 1852040 AGGCCGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGC 1852099
||| ||||||||||| ||| ||||| | ||||||||||| || ||||| ||
Sbjct 254221 AGGTCGATCTTGGAGTTGGCGTCGCTCGACGACATCTTGCCGCCCTGC---AGGCCGGGG 254277
Query 1852100 ACGAGCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGC 1852159
|| | ||||| | | ||| ||||| || || || || ||||| |||
Sbjct 254278 ACCATGGGGTTCATGATGTGCGCGCGCTGGCGGTACCCCAGCTTGGGCAGCCAGTCCTTG 254337
Query 1852160 GCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 1852219
||| | || | ||||||||||||| ||||| ||||| |||| |||||||||| |
Sbjct 254338 GCAGCCGTGAAGAGCTTGCGCTGGTCGACGCCGCCGAACTGCACGTCCACGTCGAGGTAC 254397
Query 1852220 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTT-GCGGTC 1852278
||||||||||| |||||| || |||||||||| | | |||| ||| ||| || ||
Sbjct 254398 TGCTCGTCGAGCACCTGCAGGATGGGGTAGAGCAGGCCGGACAGGGGCGCGTTGGCCGT- 254456
Query 1852279 CATCTTGACCACCTGAGCGGCGGCCT--TTTGCGCCGTGC 1852316
| |||||| |||| ||| |||||| || ||| |||||
Sbjct 254457 CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 254496
>seq36
Length=274094
Score = 104 bits (114), Expect = 3e-16
Identities = 97/121 (80%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 344182 GTGGCCTTCCCCACCGAGACCGTCTACGGCCTCGGCGCCGACGCCACGTCTGA-CGAGGC 344240
|| || |||||||| || |||||||||||||||||||| ||||||||| || | || ||
Sbjct 196601 GTCGCATTCCCCACAGAAACCGTCTACGGCCTCGGCGCGGACGCCACG-CTCACCGCCGC 196659
Query 344241 CGTGCGGCGCATCTTTGAGGTCAAGGGCCGACCCTCCAACAACCCGATCATTGTGCACGT 344300
||| | |||||| | | ||||||||| ||||| |||||||| |||| ||||||||
Sbjct 196660 CGTAAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCGCTCATCGTGCACGT 196719
Query 344301 G 344301
|
Sbjct 196720 G 196720
>seq17
Length=381168
Score = 104 bits (114), Expect = 3e-16
Identities = 140/190 (74%), Gaps = 5/190 (3%)
Strand=Plus/Plus
Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025
||||| ||| |||||| || |||||||||||| |||||||||||||| ||||| || |
Sbjct 16497 GTCGACGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTCGTGCGGGGCTTCTCAAG 16556
Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085
||||||||||||| | ||| || | | ||||| | | ||||||| || | | ||
Sbjct 16557 GTAGGCGCGCATGATGATGCAGAGGTCAT--CCGACAGCTTGTCGGACAGAGACTTG-AG 16613
Query 1727086 GC-GTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAA 1727144
| ||||| | || || | | ||| || |||||||| || || || ||||||| ||
Sbjct 16614 TCTGTCGG-CGTACTCAAGGGCGGTGGCGGGGTCGTGGATGGAGCAGGGGCCAACGACAA 16672
Query 1727145 CCAGCAGCCG 1727154
| ||||| ||
Sbjct 16673 CAAGCAGGCG 16682
>seq139
Length=75861
Score = 86.0 bits (94), Expect = 8e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1254437 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGA 1254496
|||||||||| ||| || |||| ||||||||||| || ||||||| || ||||| |
Sbjct 61481 GGCCTCGGTGGCGACCCGCTCGAAGATGTCGTTGACGAAAGAGTTCAGGATAGACATGGC 61540
Query 1254497 CTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538
||||||||| || ||||||||| ||||||||||| ||
Sbjct 61541 ACGGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 61582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107100219275575
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