Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq14 168 6e-37 seq4 107 2e-18 seq80 82.4 7e-11 >seq14 Length=442650 Score = 168 bits (186), Expect = 6e-37 Identities = 963/1522 (63%), Gaps = 68/1522 (4%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | |||||| || || || || | || || || ||| ||||| |||| | || Sbjct 87487 GTTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGG 87546 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| || | |||||||| ||||||||||| | |||| ||||| |||||| ||||| Sbjct 87547 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCAT 87606 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 ||| | || || | |||||| |||||| | |||| | | ||||||||| Sbjct 87607 CAACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCA 87666 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 | ||| ||| | | |||||| || || || | | |||| |||| ||| Sbjct 87667 AAGATCAGAAGGCTGGACGCCCCACATGTCATATTGAAGCTGTCCC-----TGCGAGACG 87721 Query 138741 G-----CCTTCGTACGAATCGTATACACCA--AACTCTTGCGCCAACTCGTTGCTCGCCT 138793 | || ||||| | | |||| || ||| |||| || | ||| ||| Sbjct 87722 GGGGATCCCTCGTATGTCTGGTATGGGCCGTCAAC-CTTG-GCGATGTCGCAAGACGCAG 87779 Query 138794 CGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGC 138853 | ||| | | ||| || || ||| ||||| | || ||| || ||||| | | Sbjct 87780 TCAAAGCAGCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGG 87839 Query 138854 TCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGA 138913 ||| | ||||||||||| | ||| || ||||| || || || || || || || | Sbjct 87840 ACTCAAATGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAA 87899 Query 138914 CAGGGCGATGGCGCAGATTTGACGCTTTTG-----CGGCTTCGATAGGATAATAGTTTAC 138968 || | || |||| || ||| ||| | |||| | || || | ||| || Sbjct 87900 TGGGCCTGTGTCGCATGTT----GCTGTTGTATGCCTCCTTC-ACGGGGTAGTGGTTGAC 87954 Query 138969 ATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAA 139028 ||| ||||| ||||| | || || || || |||| || | | | | | || Sbjct 87955 ATCAATGATCTTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAA 88014 Query 139029 ATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACA--AATCGAG 139086 | ||| | ||||| ||| | || ||| || | || || | ||| ||| Sbjct 88015 GTTGTAG------CAGTTGTTTTCGTAG---TCAACATAT--GCTGGCAGAGCAATGGAG 88063 Query 139087 GCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAA 139146 || | |||||| || ||||| || || || | | ||| |||| || |||| |||| Sbjct 88064 GCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGG 88123 Query 139147 TTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTG 139206 || | ||| || || | || | || ||||| || ||||| || ||||| ||| Sbjct 88124 TTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTG 88183 Query 139207 TAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCC 139266 || ||||| | || |||| || || || | ||| | ||| | ||| | | Sbjct 88184 TAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATGGCGTACCACAGCTTC 88243 Query 139267 CTAGCTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTC 139322 ||| | || ||| || || | | || | ||||||||| ||||| || | Sbjct 88244 TGAGCCTTCATGGTCTTGCGGC-CGC---GGCCTTCTCTCTCGTACTTCTCGTACAGAGC 88299 Query 139323 GTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCG 139381 ||||| |||| |||||||| ||||| ||| | | |||| || || |||||||| | Sbjct 88300 CTCGAACTCGT-CACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGG 88358 Query 139382 ACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACA 139441 ||| |||||||| || || ||| ||||||| || || |||||||| | ||| | | Sbjct 88359 TCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGA 88418 Query 139442 GCAAATCGCGCGCCTTCTTATCT--TCCGAACCCATGTTACGTTTCATGTTAAGGAAATC 139499 | ||||| || || | || ||| ||| ||| | || || ||||| || Sbjct 88419 AGAGGTCGCGGGC--TCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAGGAACTC 88476 Query 139500 AAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCC 139556 || || |||||||||||||| ||||| ||||| || | || || || || || Sbjct 88477 GAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTATTACC 88536 Query 139557 ACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCT 139616 ||| || || |||| || ||| || ||||| || || | ||| || | |||| | Sbjct 88537 ACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTT 88596 Query 139617 CGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACAT 139672 | || |||||||| || | | | | | | || || |||| || || | Sbjct 88597 TGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGT----GGCACGGATACGGTGGACGT 88652 Query 139673 TGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTAT 139731 | | || || || ||| | | ||||| || | ||||| || | | || ||||| Sbjct 88653 TCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTG-AGAGTATCGTAG 88711 Query 139732 ATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGT 139791 |||||| || ||||| |||| ||| ||| || ||||| ||||| | || || | Sbjct 88712 ATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTGG 88771 Query 139792 TTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAAT 139851 ||| || || ||||| ||||| ||||||||||| | || | |||||||| Sbjct 88772 GGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGACATCAGG 88831 Query 139852 TCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATC 139911 | |||||| || || | ||| ||||||| ||| |||||| |||| || ||||| Sbjct 88832 TTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACACGCATG 88891 Query 139912 AGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG--ATAACCGTTCT 139969 | ||| || || ||||||| | || ||| |||| || || || |||| || Sbjct 88892 ATCATGTGCTGTGGCCGTTCGACGACTTTGCCATCGAGCTTGAGGAGGTATGACCG--CT 88949 Query 139970 CTAGGGTCTTGTAGCCAAAGTA 139991 | | ||||||| |||| ||||| Sbjct 88950 CCAAGGTCTTGAAGCCGAAGTA 88971 >seq4 Length=784365 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || || || || || || || || || Sbjct 47164 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 47105 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 47104 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 47045 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||||| || ||||| ||||| | | |||| || || ||| Sbjct 47044 CAGCGCCTGATCTTTGCCGGAAAGCAGCTCGAGGACGGTCGTACTCTGTCCGACTACAAC 46985 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| || || || |||||||| Sbjct 46984 ATTCAGAAGGAGTCTACTCTCCACTTGGT 46956 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || ||||| || || || || ||||| || || | Sbjct 47395 ACCATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCT 47336 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 ||||||| | || | || || ||||| || ||||| || ||||| ||||| || Sbjct 47335 TCCGACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCTCCTGAC 47276 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || ||||||||||||| || ||||| ||||| | | | | || || || Sbjct 47275 CAGCAGCGCCTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTAC 47216 Query 24881 AACATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| || || || ||| Sbjct 47215 AACATCCAGAAGGAGTCCACCCTTCAC 47189 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || ||||| || || || || || || || | Sbjct 46936 ATGCAGATCTTCGTCAAGACATTGACGGGAAAAACGATAACACTAGAGGTGGAGTCCTCA 46877 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || || || || Sbjct 46876 GACACCATTGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 46817 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||| |||| ||| | | |||| || || || Sbjct 46816 CAGCGTCTCATCTTCGCTGGAAAGCAGTTGGAAGATGGCCGGACGCTGTCTGACTACAAT 46757 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||||||||| | || |||| || || Sbjct 46756 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGTCTGCGTGGTGG 46710 >seq80 Length=149332 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || || | Sbjct 52685 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACCATCACCCTTGAGGTGGAGTCCTCG 52744 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 52745 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAG 52804 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||| ||||| | | | | || || || ||| Sbjct 52805 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 52864 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || ||| | |||||||| Sbjct 52865 ATCCAGAAGGAGAGCACCCTTCACCTCGTGTTGCG 52899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894928733000