Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq22 111 1e-19 >seq22 Length=350476 Score = 111 bits (122), Expect = 1e-19 Identities = 177/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 |||||||| |||||| |||||| |||||||| | ||| || || || | ||| Sbjct 119119 ACAAACTTCTTGATGAAGATATCAAGAAGGTCCTGGAGCTTGCTAGACTCATGAGCACCG 119178 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || || | ||| || | | || || || || || ||| | ||| Sbjct 119179 TTGATGATCCAGCGATCATCCTTGGGGTCAATGTTGGTCTGAGCACCAAGTTCGAAACCG 119238 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 ||| |||| || ||| | | ||||| | || | || ||||| || || |||| Sbjct 119239 AAGAACTTGATCAAGTAGGAGCCAGGACGAGCGAGGGACTGGGCGACGCTGGTCAGGTTG 119298 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 || ||||| |||||||| ||||||||||| ||||||||||||| || ||| ||| Sbjct 119299 ACAATGACGGTCTTGATACCGTTGCCCTTGCCTTCGACCTTGGTCTGGAGACGCTCCATC 119358 Query 34591 TTGTAGCGGTAGAA 34604 |||||||| ||||| Sbjct 119359 TTGTAGCGATAGAA 119372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839210034175