Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq27 161 2e-33
seq37 138 2e-26
seq88 125 1e-22
seq14 120 5e-21
seq63 118 2e-20
seq36 107 3e-17
seq139 93.3 7e-13
>seq27
Length=305726
Score = 161 bits (178), Expect = 2e-33
Identities = 351/521 (67%), Gaps = 12/521 (2%)
Strand=Plus/Minus
Query 2018925 GAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTGCCTAC 2018984
|| || |||||||| | |||||||||||||| ||||||| | | | | |
Sbjct 224689 GAGAAATACCGCCCCGTCTTCCTCGACGACATCGTCGGCAACGTCGAGACGATAGAACGC 224630
Query 2018985 CTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGC 2019044
|||||| | ||| ||||||||||||||| || || | | | ||| |||||||
Sbjct 224629 CTCAAGATCATCGCCAAAGACGGCAACATGCCCCACGTCATCATCTCAGGCATGCCCGGC 224570
Query 2019045 ACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGAC 2019104
| |||||||| || ||| | ||||| ||||| ||| |||||| || | |
Sbjct 224569 ATCGGCAAGACGACCAGCGTGCTCTGCCTCGCGCGACAACTCCTGGGCGACGCATACAAG 224510
Query 2019105 GAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC 2019164
|||||||| || |||||||| ||||| || |||||||| | ||||| ||||| | |
Sbjct 224509 GAGGCCGTACTGGAACTCAACGCGTCCGATGAGCGCGGAATAGACGTGGTGCGGAACCGC 224450
Query 2019165 ATCAAGCATCACGCTTCG---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGA 2019219
|||||| |||||| | ||||| || ||||| ||||| || |||||| |
Sbjct 224449 ATCAAG-----GGCTTCGCCCAGAAGAAGGTCACGCTGCCTCCCGGACGGCACAAGATTG 224395
Query 2019220 TCATCCTCGATGAGGCCGACTGCCTTACG-TCGGCGGCCCAGCAGGCCCTCCGATCGACC 2019278
|||||||||| ||||| ||| || | ||| |||| || |||||||| | | |||
Sbjct 224394 TCATCCTCGACGAGGCGGACAGCATGACGAGCGGC-GCGCAGCAGGCTTTGAGGCGGACT 224336
Query 2019279 ATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTC 2019338
||||| | ||| | || ||||| ||||| || | || |||||| |||| | | ||
Sbjct 224335 ATGGAGATCTACTCGAATACGACTCGGTTCGCCTTTGCGTGCAACCAGTCGAACAAGATC 224276
Query 2019339 ATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398
|| || | | ||| || || || ||| |||| | ||| | | || || | ||||
Sbjct 224275 ATTGAGCCGTTGCAGTCGCGATGTGCGATCCTGCGGTACGCGAGGTTGACGGATGGCCAG 224216
Query 2019399 ATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439
| | ||| || | |||| ||||| || || |||||
Sbjct 224215 GTGGTTAAGCGCCTACTACAGATCATCGAGGCAGAGAAGGT 224175
>seq37
Length=263410
Score = 138 bits (152), Expect = 2e-26
Identities = 201/280 (72%), Gaps = 7/280 (3%)
Strand=Plus/Plus
Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442
|| || ||||||||| ||| ||||| | |||||||||| ||| ||||| ||
Sbjct 254221 AGGTCGATCTTGGAGTTGGCGTCGCTCGACGACATCTTGCCGCCCTGC---AGGCCGGGG 254277
Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGC 2411502
|||| ||||| | | ||| ||||| |||||| |||||| ||||| |||
Sbjct 254278 ACCATGGGGTTCATGATGTGCGCGCGCTGGCGGTACCCCAGCTTGGGCAGCCAGTCCTTG 254337
Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562
||| | |||| ||||||||||||| ||||| ||||| |||| |||||||||| |
Sbjct 254338 GCAGCCGTGAAGAGCTTGCGCTGGTCGACGCCGCCGAACTGCACGTCCACGTCGAGGTAC 254397
Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTC 2411621
||||||||||| |||||| || ||||||| ||| | || |||| ||| || ||
Sbjct 254398 TGCTCGTCGAGCACCTGCAGGATGGGGTAGAGCAGGCCGGACAGGGGCGCGTTGGCCGT- 254456
Query 2411622 CATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGC 2411659
| |||||| |||| |||| |||||| || ||| |||||
Sbjct 254457 CTGCTTGACGACCTCGGCGCCGGCCTTCTTGGCGTCGTGC 254496
>seq88
Length=140259
Score = 125 bits (138), Expect = 1e-22
Identities = 181/253 (72%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 56885 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAA 56944
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||||| | | |||| ||||||| || |
Sbjct 56945 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTGCCAA 57004
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | |||| || |||||||| ||||| || |||||||| ||| ||| ||||||||
Sbjct 57005 GGGCGACAAGGAGACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCA 57064
Query 794071 TGCCGATGAG-CGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||||| || | || ||| || | |||| | | ||||| ||||| || |||||||
Sbjct 57065 TGCCGAGCAGACTGCA-GGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCA 57123
Query 794130 TCGATGATGATCT 794142
|| |||||||||
Sbjct 57124 TCAGTGATGATCT 57136
>seq14
Length=442650
Score = 120 bits (132), Expect = 5e-21
Identities = 273/412 (66%), Gaps = 10/412 (2%)
Strand=Plus/Plus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| || || ||||||||||||||||| | || |||| |||||||||| ||||||
Sbjct 88101 ACTCGATGATCTCGGTGCACAGGTTGGAG--CTGCGGATGGTTCCCAGGTTCTTCTGGTT 88158
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| | ||||| ||| ||||||| |||||| | || || |||||| |||| ||
Sbjct 88159 GCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGC 88218
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CG--CGCGGCCCTN 2071748
| || |||||| |||| | | | || || |||| | || ||||||| |
Sbjct 88219 CTCGAGGATGGCGTACCACAGCTTCTGAGCCTTCAT---GGTCTTGCGGCCGCGGCCTTC 88275
Query 2071749 NNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGG 2071808
| || || || || || | |||| ||| || ||||| ||
Sbjct 88276 TCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGG 88335
Query 2071809 CGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAG 2071868
|||| ||||| | ||| | |||||||||| || | || || ||| || ||
Sbjct 88336 GCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAG 88395
Query 2071869 GTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT 2071928
||| |||| || | ||||| ||||| || ||| ||||||||| ||||||||
Sbjct 88396 GTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTT 88455
Query 2071929 CTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980
|||| || |||||| | |||| || || |||||||| ||||||||||||
Sbjct 88456 CTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAG 88507
Score = 118 bits (130), Expect = 2e-20
Identities = 182/260 (70%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || || || |||| ||| ||||| || |||||||| | | ||||| ||
Sbjct 88540 CTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGA 88599
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| ||||||||| || || | ||| | ||| | ||| || | ||| || | ||
Sbjct 88600 CGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGACC 88659
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || |||||| ||||||||| | ||||| | || || || |||||||| || ||
Sbjct 88660 AATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATCGTAGATACCTTC 88719
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | || ||||||||||| || || | | ||| ||
Sbjct 88720 AATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACC 88779
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
|||||||| || || ||||
Sbjct 88780 AGCATTGAACAGTGTAGGCG 88799
>seq63
Length=186541
Score = 118 bits (130), Expect = 2e-20
Identities = 95/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035641 ATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700
|| || || ||||||||| | ||||||||| | || || ||| | || |||||||| ||
Sbjct 106410 ATTCTTGCTGCCAACTACATGGACATCAAGGCGCTTCTGGATGTCGGCTGCAAGACAGTT 106469
Query 2035701 GCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
|||||| | |||||||||||||| |||||||| || ||||||||||| |||||||
Sbjct 106470 GCCAACATGATCAAGGGCAAGTCTCCCGAGGAGATTCGCAAGACCTTCAACATCA 106524
>seq36
Length=274094
Score = 107 bits (118), Expect = 3e-17
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCG-TCAGACGAGGC 2233149
||||| || ||||| || |||||||| ||||||||||| ||||| || ||| || ||
Sbjct 196601 GTCGCATTCCCCACAGAAACCGTCTACGGCCTCGGCGCGGACGCCACGCTCA-CCGCCGC 196659
Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209
|||| || |||||| | |||||||||||| || || |||||||| |||||||||||||
Sbjct 196660 CGTAAAGGGCATCTACGCCGCCAAGGGCCGGCCCTCGGACAACCCGCTCATCGTGCACGT 196719
Query 2233210 G 2233210
|
Sbjct 196720 G 196720
>seq139
Length=75861
Score = 93.3 bits (102), Expect = 7e-13
Identities = 118/160 (74%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 1485546 GGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCC-GG 1485604
|||||||||||| |||| | ||| ||| |||||| || ||| | || ||
Sbjct 61424 GGTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAGGCGGCGAGCTTAGAGG 61482
Query 1485605 CCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATT 1485664
|||||||| ||| || |||| ||||||||||| || ||||||| ||| ||||| |
Sbjct 61483 CCTCGGTGGCGACCCGCTCGAAGATGTCGTTGACGAAAGAGTTCAGGATAGACATGGCAC 61542
Query 1485665 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||||||||| || ||||||||| ||||||||||| ||
Sbjct 61543 GGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 61582
Score = 86.0 bits (94), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| || ||||||||| ||||||| || ||| |||
Sbjct 61292 GTACTTGGTGACGGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCACCGGGCAG 61351
Query 1485531 GATCAGGCGCAC 1485542
|||||| || ||
Sbjct 61352 GATCAGACGAAC 61363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916195872083525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |