Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq80 154 1e-32 seq4 141 6e-29 seq5 118 7e-22 >seq80 Length=149332 Score = 154 bits (170), Expect = 1e-32 Identities = 165/216 (76%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| ||||||||||||||| ||||| ||||| || ||| | || | || || Sbjct 52893 ACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCG 52834 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| |||||||||||||| || |||||||| | || | ||||||||||| | Sbjct 52833 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 52774 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || ||||| || | ||||| || || ||| || |||| ||| ||||| Sbjct 52773 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGT 52718 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||| |||||||||||||| || |||||||||||||| Sbjct 52717 CTTCCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 52682 >seq4 Length=784365 Score = 141 bits (156), Expect = 6e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 47181 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 47240 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||| |||||||| || |||||||| | || | ||||||||||| Sbjct 47241 TCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCC 47300 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | ||| |||||| Sbjct 47301 TGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 47360 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 47361 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 47393 Score = 122 bits (134), Expect = 6e-23 Identities = 146/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || || | || | || || || ||||||||||| || Sbjct 46973 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCGTCCTCGAGCTGCTTTCCGGCAAA 47032 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || |||||||| | || | ||||||||||| | || || ||||| | Sbjct 47033 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--A 47090 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | ||||| || || |||||| |||| || |||||||| || |||||||||| Sbjct 47091 T--TGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCT 47148 Query 34962 TTACAAAGATCTGCAT 34977 | |||||||| ||||| Sbjct 47149 TGACAAAGATTTGCAT 47164 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| || || ||||| || || | || |||| Sbjct 46725 AGCACCAAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAGCGTCCGGCCATCT 46784 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| |||||||| || || ||||||||| | || | ||||||||||| Sbjct 46785 TCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCC 46844 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || || ||| || || | ||||| || Sbjct 46845 TGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGACTCCACCTCTAGTGTTATCGTT 46904 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| | ||||| || ||||||||||| Sbjct 46905 TTTCCCGTCAATGTCTTGACGAAGATCTGCAT 46936 >seq5 Length=773751 Score = 118 bits (130), Expect = 7e-22 Identities = 139/186 (75%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| |||| |||| || || ||||| |||||||||| Sbjct 717621 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 717562 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | ||||||||||| | || || ||||| || Sbjct 717561 TCAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 717505 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| |||| ||| |||||||| ||||| |||||||| Sbjct 717504 -TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTC 717446 Query 34964 ACAAAG 34969 || ||| Sbjct 717445 ACGAAG 717440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690914544025