Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq47 93.3 3e-13 >seq47 Length=232334 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | ||||||||||| |||||| | ||| |||| || | || || Sbjct 70060 GAATTCTTCTTCCACGCCATGGCTGGTCGAGAAGGTTTGATTGATACTGCAGTCAAGACC 70119 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252 ||||| || ||||| ||||| | ||||||||| |||||||||| | | | || Sbjct 70120 GCTGAAACAGGTTACATTCAGCGCCGCCTTGTCAAGGCGCTTGAAGATGTCACCGCAAAA 70179 Query 435253 TATGATGGTACAGTGAGAAAT 435273 || |||||||| || ||||| Sbjct 70180 TACGATGGTACCGTTCGAAAT 70200 Score = 86.0 bits (94), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || || || |||||| || |||| || ||||||||||| ||||| ||| | ||||| ||| Sbjct 68626 GGCAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGAAAACGTGTGGATTTCTCTGCCCGT 68685 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || ||||| |||| | ||||| |||| | ||||| ||||| || | | ||| Sbjct 68686 ACCGTCATTACAGGTGATGCGAATATCTCTCTGGACGAAGTCGGTGTACCGCGGAGCATT 68745 Query 432408 GCGAAAA 432414 |||| || Sbjct 68746 GCGAGAA 68752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740607079507350