Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq47 93.3 3e-13
>seq47
Length=232334
Score = 93.3 bits (102), Expect = 3e-13
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192
||||| |||||||| | ||||||||||| |||||| | ||| |||| || | || ||
Sbjct 70060 GAATTCTTCTTCCACGCCATGGCTGGTCGAGAAGGTTTGATTGATACTGCAGTCAAGACC 70119
Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTAAACAAGAA 435252
||||| || ||||| ||||| | ||||||||| |||||||||| | | | ||
Sbjct 70120 GCTGAAACAGGTTACATTCAGCGCCGCCTTGTCAAGGCGCTTGAAGATGTCACCGCAAAA 70179
Query 435253 TATGATGGTACAGTGAGAAAT 435273
|| |||||||| || |||||
Sbjct 70180 TACGATGGTACCGTTCGAAAT 70200
Score = 86.0 bits (94), Expect = 5e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
|| || || |||||| || |||| || ||||||||||| ||||| ||| | ||||| |||
Sbjct 68626 GGCAAGGAGGGTCGTCTTCGAGGTAACTTGATGGGAAAACGTGTGGATTTCTCTGCCCGT 68685
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| || ||||| |||| | ||||| |||| | ||||| ||||| || | | |||
Sbjct 68686 ACCGTCATTACAGGTGATGCGAATATCTCTCTGGACGAAGTCGGTGTACCGCGGAGCATT 68745
Query 432408 GCGAAAA 432414
|||| ||
Sbjct 68746 GCGAGAA 68752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740607079507350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |