Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq14 244 1e-59 seq4 131 2e-25 seq80 123 2e-23 seq5 114 1e-20 seq88 113 4e-20 >seq14 Length=442650 Score = 244 bits (270), Expect = 1e-59 Identities = 988/1538 (64%), Gaps = 35/1538 (2%) Strand=Plus/Plus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| |||||||| || ||||| || ||| | || | ||| || | || Sbjct 87488 TTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGC 87547 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 || || ||||||||||||||| |||||||| || | ||| || |||||| ||| | | Sbjct 87548 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATC 87607 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTAT-TTTGCGCTTCAGAGCCGCCCAGTCCCA 148438 | || ||| || | |||| | | || || ||||| ||||| ||| |||||||||| Sbjct 87608 AACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGC-CTTCAAAGCATCCCAGTCCCA 87666 Query 148439 GAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGC 148497 || || || ||| ||||||||| || || || || | | || || ||||| Sbjct 87667 AAGATCAGAAGGCTGGACGCCCCACATGTCATATTGAAG-CTGTCCCTGCGAGACGGGGG 87725 Query 148498 TGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCG 148557 |||||||| | ||| || |||| || || | ||||| ||| | | Sbjct 87726 ATCCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAG 87785 Query 148558 CGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGT 148617 | ||| ||| || |||||| || || |||| ||| | ||| | || Sbjct 87786 CAGCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAA 87845 Query 148618 ACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCC 148677 | ||||| || || || || || |||||||| ||||| || || || |||||||||| Sbjct 87846 ATGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCC 87905 Query 148678 GGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCT 148737 |||| |||||| | | || || | || ||||||||| || ||||||| Sbjct 87906 TGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCT 87965 Query 148738 TGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGT---ACT 148794 ||| || ||||| || || |||| || | | | || | || | || | | Sbjct 87966 TGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGT 88025 Query 148795 TGTCATC-TACGATGCATCGGTT--CACGGCGATAGAGGCTAGATTGCACACGGCCGTCT 148851 ||| || || ||| | | || || || ||||| || ||||| || ||| || Sbjct 88026 TGTTTTCGTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCT 88085 Query 148852 CATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCA 148911 |||| || || | |||||| | |||||||| |||||| ||| || ||| |||| Sbjct 88086 CATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCA 88145 Query 148912 CGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAG 148971 |||||| || |||||||||| |||||| || |||||||| |||||| | || ||| | Sbjct 88146 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGG 88205 Query 148972 TTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCA----CTTGC 149024 | || ||| | || | || | ||| ||| | ||| || || ||||| Sbjct 88206 TCTCGGTCTGGGCCTCGAGGATGGCGTACC---ACAGCTTCTGAGCCTTCATGGTCTTGC 88262 Query 149025 TGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGT 149082 || ||| || || |||||| | ||| | ||| ||||||| | || |||| Sbjct 88263 GGC----CGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGC--CTCGAACTCGTCACCGT 88316 Query 149083 AGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGT 149142 |||| || | || || ||||||| || ||||||||||| | ||| |||||| | | Sbjct 88317 AGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCT 88376 Query 149143 ACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGC 149202 || |||||||| || || || || | |||||| || | ||||||||| || | Sbjct 88377 CAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGA 88436 Query 149203 AGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACG 149262 || || || ||| |||| || ||| | ||| | || |||||||| | Sbjct 88437 CCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATG 88496 Query 149263 GCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCA 149319 |||| | ||| | |||| || || ||| || || |||||||| |||| || Sbjct 88497 GCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGG 88556 Query 149320 CCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGC 149379 | ||||||| || || |||| ||| || || || | | |||||||| ||| | Sbjct 88557 CAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGG 88616 Query 149380 TAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACT 149439 ||| | ||| || || | ||| ||||| | || || || ||| | || Sbjct 88617 CGATGTAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCT 88676 Query 149440 TTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTC 149498 | ||||| |||| |||| ||| || |||||| || || || ||||| |||| Sbjct 88677 TGGAGATCATGGCGCAAGTC-TTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTC 88735 Query 149499 ATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTG 149558 ||| | || |||||||| ||| || || |||| || || ||||| || Sbjct 88736 ATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTA 88795 Query 149559 GGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCC 149618 || ||||| || || |||| || ||||| | ||||| ||| | || | || Sbjct 88796 GGCGATGCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCA 88855 Query 149619 ATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCC 149678 || ||||| || ||| || | || || ||||| | ||| ||||| || || || | Sbjct 88856 ATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACG 88915 Query 149679 ACTTTGTTTCCAATTTTGAGCAAGTA-GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTT 149737 |||||| | | ||||| | ||| | | | | || |||||| |||| ||||| | Sbjct 88916 ACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTCCAAG-GTCTTGAAGCCGAAGTATTG 88974 Query 149738 GTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775 ||| | ||||| ||| | | ||||||| | ||||| Sbjct 88975 ATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTCGA 89012 >seq4 Length=784365 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| | ||| |||||| |||||||| || Sbjct 47195 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCC 47254 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| |||||||| || |||||||| ||||| ||| Sbjct 47255 GGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTT 47314 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||||| | |||||| |||| ||||| ||| |||||||| || || Sbjct 47315 GACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 47374 Query 133643 TTTTACGAAAATCTGCATGG 133662 || ||||| |||||||||| Sbjct 47375 CTTGACGAAGATCTGCATGG 47394 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| ||| || || |||| ||||||||||||||| | Sbjct 46968 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGT--ACGACCGTCCTCGAGCTGCTTTC 47025 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || |||||||||||||| |||||||| |||||||| |||||| || Sbjct 47026 CGGCAAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 47085 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| || ||| || || | |||| ||| ||||| || || | Sbjct 47086 TGACATTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGG 47145 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 47146 TCTTGACAAAGATTTGCAT 47164 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| |||||||| || || ||| | | | || || | Sbjct 46731 AAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAGCGTCCGGCCA-TCTTCCAA 46789 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | ||||| ||||||||||| || ||||| || |||||||| ||| Sbjct 46790 CTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGAT 46849 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| ||||| | || |||||| || | || | ||||| || Sbjct 46850 CTTGCTCTTCACGTTGTCAATGGTGTCTGAGGACTCCACCTCTAGTGTTATCGTTTTTCC 46909 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 46910 CGTCAATGTCTTGACGAAGATCTGCAT 46936 >seq80 Length=149332 Score = 123 bits (136), Expect = 2e-23 Identities = 149/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 |||| ||| ||||| || ||||| ||| | || ||| |||||||||||||||| Sbjct 52882 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTG 52825 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || |||||||||||||| |||||||| |||||||| ||||| | Sbjct 52824 CCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGAC 52765 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||| | || |||||| || | ||||| ||| || || || || Sbjct 52764 TTGACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTGAGG 52705 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||||||| Sbjct 52704 GTCTTGACGAAGATCTGCATG 52684 >seq5 Length=773751 Score = 114 bits (126), Expect = 1e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| || ||| | | | ||||||||||||||||| ||| | || Sbjct 717619 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 717561 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 | ||||||||||| || |||||||| |||||||| |||||| ||||| | || Sbjct 717560 CAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTC 717501 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||||| || ||| || || | ||||| ||| ||||| ||||| || || ||||| Sbjct 717500 GATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 717441 >seq88 Length=140259 Score = 113 bits (124), Expect = 4e-20 Identities = 349/527 (66%), Gaps = 31/527 (6%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 56898 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 56957 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | | || || ||| | ||| | || || || Sbjct 56958 CATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTGCCAAGGGCGACAAGGAG 57017 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCA-ACG 120529 ||||| || || ||||| ||||||| ||| | ||||||||||| |||| || Sbjct 57018 ACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGACT 57077 Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 || || | ||| || || ||||||||||||||| | || || || ||| || Sbjct 57078 GCAG-GGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATCAGTGA---TG- 57132 Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC----GGT---AGTACAG- 120641 || | | | | || |||| | ||| |||| ||| || |||| Sbjct 57133 -----ATCTTCTCGACACGCGCCTTGCT---GGGGCG-GTTCCTCAGGTGAGAGAACAGC 57183 Query 120642 --GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||| || ||||| |||||||| |||||||| || || |||||||||||| || ||| Sbjct 57184 AGGCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTC 57243 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGC-AAAGCTGCCCGAAAA 120758 || || ||||| | || | |||| | |||| |||| ||| ||||| || || Sbjct 57244 AGACCAGGCATCAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGC-ACCGCTGAA 57302 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-- 120816 ||| | ||||| || || ||||| |||| |||| || | || | | || || Sbjct 57303 GAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGAGCGTAGGTAGAC-TCGTGGT 57361 Query 120817 CTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | || ||||||||||| |||||| |||||||| || || | ||| || Sbjct 57362 CCGT-GATCCACTTCAGGGCCCAGTCGGCCTTCTTACGGATGCAGGG 57407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417929689000