Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq14 244 1e-59
seq4 131 2e-25
seq80 123 2e-23
seq5 114 1e-20
seq88 113 4e-20
>seq14
Length=442650
Score = 244 bits (270), Expect = 1e-59
Identities = 988/1538 (64%), Gaps = 35/1538 (2%)
Strand=Plus/Plus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| |||||||| || ||||| || ||| | || | ||| || | ||
Sbjct 87488 TTGACGACCTGGAACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGC 87547
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
|| || ||||||||||||||| |||||||| || | ||| || |||||| ||| | |
Sbjct 87548 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATC 87607
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTAT-TTTGCGCTTCAGAGCCGCCCAGTCCCA 148438
| || ||| || | |||| | | || || ||||| ||||| ||| ||||||||||
Sbjct 87608 AACAAGCTGTTTCGGATACCGTGCTCCTTGATCTTTGC-CTTCAAAGCATCCCAGTCCCA 87666
Query 148439 GAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGC 148497
|| || || ||| ||||||||| || || || || | | || || |||||
Sbjct 87667 AAGATCAGAAGGCTGGACGCCCCACATGTCATATTGAAG-CTGTCCCTGCGAGACGGGGG 87725
Query 148498 TGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCG 148557
|||||||| | ||| || |||| || || | ||||| ||| | |
Sbjct 87726 ATCCCTCGTATGTCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAG 87785
Query 148558 CGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGT 148617
| ||| ||| || |||||| || || |||| ||| | ||| | ||
Sbjct 87786 CAGCGTGGTAGATGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAA 87845
Query 148618 ACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCC 148677
| ||||| || || || || || |||||||| ||||| || || || ||||||||||
Sbjct 87846 ATGGCATGCGGAGAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCC 87905
Query 148678 GGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCT 148737
|||| |||||| | | || || | || ||||||||| || |||||||
Sbjct 87906 TGTGTCGCATGTTGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCT 87965
Query 148738 TGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGT---ACT 148794
||| || ||||| || || |||| || | | | || | || | || | |
Sbjct 87966 TGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTAGCAGT 88025
Query 148795 TGTCATC-TACGATGCATCGGTT--CACGGCGATAGAGGCTAGATTGCACACGGCCGTCT 148851
||| || || ||| | | || || || ||||| || ||||| || ||| ||
Sbjct 88026 TGTTTTCGTAGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCT 88085
Query 148852 CATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCA 148911
|||| || || | |||||| | |||||||| |||||| ||| || ||| ||||
Sbjct 88086 CATCAGGAGCACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCA 88145
Query 148912 CGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAG 148971
|||||| || |||||||||| |||||| || |||||||| |||||| | || ||| |
Sbjct 88146 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGG 88205
Query 148972 TTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCA----CTTGC 149024
| || ||| | || | || | ||| ||| | ||| || || |||||
Sbjct 88206 TCTCGGTCTGGGCCTCGAGGATGGCGTACC---ACAGCTTCTGAGCCTTCATGGTCTTGC 88262
Query 149025 TGCTCGTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGT 149082
|| ||| || || |||||| | ||| | ||| ||||||| | || ||||
Sbjct 88263 GGC----CGCGGCCTTCTCTCTCGTACTTCTCGTACAGAGC--CTCGAACTCGTCACCGT 88316
Query 149083 AGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGT 149142
|||| || | || || ||||||| || ||||||||||| | ||| |||||| | |
Sbjct 88317 AGCAGTCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCT 88376
Query 149143 ACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGC 149202
|| |||||||| || || || || | |||||| || | ||||||||| || |
Sbjct 88377 CAACCCGCTTCATGAAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGA 88436
Query 149203 AGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACG 149262
|| || || ||| |||| || ||| | ||| | || |||||||| |
Sbjct 88437 CCTCCTCCTTACCGTGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATG 88496
Query 149263 GCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCA 149319
|||| | ||| | |||| || || ||| || || |||||||| |||| ||
Sbjct 88497 GCTCCAGGTAGATAGCGAAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGG 88556
Query 149320 CCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGC 149379
| ||||||| || || |||| ||| || || || | | |||||||| ||| |
Sbjct 88557 CAGTGTTGTTGAAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGG 88616
Query 149380 TAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACT 149439
||| | ||| || || | ||| ||||| | || || || ||| | ||
Sbjct 88617 CGATGTAAGAGCCAGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCT 88676
Query 149440 TTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTC 149498
| ||||| |||| |||| ||| || |||||| || || || ||||| ||||
Sbjct 88677 TGGAGATCATGGCGCAAGTC-TTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTC 88735
Query 149499 ATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTG 149558
||| | || |||||||| ||| || || |||| || || ||||| ||
Sbjct 88736 ATGTCGACGAGGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTA 88795
Query 149559 GGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCC 149618
|| ||||| || || |||| || ||||| | ||||| ||| | || | ||
Sbjct 88796 GGCGATGCGTGCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCA 88855
Query 149619 ATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCC 149678
|| ||||| || ||| || | || || ||||| | ||| ||||| || || || |
Sbjct 88856 ATATCATCTCCCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACG 88915
Query 149679 ACTTTGTTTCCAATTTTGAGCAAGTA-GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTT 149737
|||||| | | ||||| | ||| | | | | || |||||| |||| ||||| |
Sbjct 88916 ACTTTGCCATCGAGCTTGAGGAGGTATGACCGCTCCAAG-GTCTTGAAGCCGAAGTATTG 88974
Query 149738 GTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775
||| | ||||| ||| | | ||||||| | |||||
Sbjct 88975 ATAGCCGAAGTCTCGGTCATATACAATGGCAGAGTCGA 89012
>seq4
Length=784365
Score = 131 bits (144), Expect = 2e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| | ||| |||||| |||||||| ||
Sbjct 47195 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCC 47254
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| |||||||| || |||||||| ||||| |||
Sbjct 47255 GGCAAAGATCAGGCGCTGCTGGTCAGGAGGGATTCCCTCCTTGTCCTGAATCTTGGACTT 47314
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| | |||||| |||| ||||| ||| |||||||| || ||
Sbjct 47315 GACGTTGTCGATAGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 47374
Query 133643 TTTTACGAAAATCTGCATGG 133662
|| ||||| ||||||||||
Sbjct 47375 CTTGACGAAGATCTGCATGG 47394
Score = 120 bits (132), Expect = 3e-22
Identities = 147/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || ||||| ||| || || |||| ||||||||||||||| |
Sbjct 46968 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGT--ACGACCGTCCTCGAGCTGCTTTC 47025
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | || || |||||||||||||| |||||||| |||||||| |||||| ||
Sbjct 47026 CGGCAAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACT 47085
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| || ||| || || | |||| ||| ||||| || || |
Sbjct 47086 TGACATTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGG 47145
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || || |||||
Sbjct 47146 TCTTGACAAAGATTTGCAT 47164
Score = 105 bits (116), Expect = 6e-18
Identities = 149/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| |||||||| || || ||| | | | || || |
Sbjct 46731 AAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCAGACAGCGTCCGGCCA-TCTTCCAA 46789
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || ||| | ||||| ||||||||||| || ||||| || |||||||| |||
Sbjct 46790 CTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGAT 46849
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | |||| ||||| | || |||||| || | || | ||||| ||
Sbjct 46850 CTTGCTCTTCACGTTGTCAATGGTGTCTGAGGACTCCACCTCTAGTGTTATCGTTTTTCC 46909
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| ||||||||
Sbjct 46910 CGTCAATGTCTTGACGAAGATCTGCAT 46936
>seq80
Length=149332
Score = 123 bits (136), Expect = 2e-23
Identities = 149/201 (74%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520
|||| ||| ||||| || ||||| ||| | || ||| ||||||||||||||||
Sbjct 52882 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTG 52825
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580
|| ||| | || || |||||||||||||| |||||||| |||||||| ||||| |
Sbjct 52824 CCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTGGAC 52765
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | || | ||||| | || |||||| || | ||||| ||| || || || ||
Sbjct 52764 TTGACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTCTTCCCCGTGAGG 52705
Query 133641 GTTTTTACGAAAATCTGCATG 133661
|| || ||||| |||||||||
Sbjct 52704 GTCTTGACGAAGATCTGCATG 52684
>seq5
Length=773751
Score = 114 bits (126), Expect = 1e-20
Identities = 135/180 (75%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| ||| || ||| | | | ||||||||||||||||| ||| | ||
Sbjct 717619 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 717561
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
| ||||||||||| || |||||||| |||||||| |||||| ||||| | ||
Sbjct 717560 CAATCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTC 717501
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| ||||||| || ||| || || | ||||| ||| ||||| ||||| || || |||||
Sbjct 717500 GATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 717441
>seq88
Length=140259
Score = 113 bits (124), Expect = 4e-20
Identities = 349/527 (66%), Gaps = 31/527 (6%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || ||||| || ||||| || ||||| || ||||| | | || ||||| |
Sbjct 56898 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 56957
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | | || || ||| | ||| | || || ||
Sbjct 56958 CATGAAGTCGAAGGGGTTGGTAGACTTGTAGACCTTCTCGTTGCCAAGGGCGACAAGGAG 57017
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCA-ACG 120529
||||| || || ||||| ||||||| ||| | ||||||||||| |||| ||
Sbjct 57018 ACGGTCGGCCACGAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCGAGCAGACT 57077
Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
|| || | ||| || || ||||||||||||||| | || || || ||| ||
Sbjct 57078 GCAG-GGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGACGACGGCATCAGTGA---TG- 57132
Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTC----GGT---AGTACAG- 120641
|| | | | | || |||| | ||| |||| ||| || ||||
Sbjct 57133 -----ATCTTCTCGACACGCGCCTTGCT---GGGGCG-GTTCCTCAGGTGAGAGAACAGC 57183
Query 120642 --GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699
||| || ||||| |||||||| |||||||| || || |||||||||||| || |||
Sbjct 57184 AGGCAAGCGAAGTCAGTGTGCAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTC 57243
Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGC-AAAGCTGCCCGAAAA 120758
|| || ||||| | || | |||| | |||| |||| ||| ||||| || ||
Sbjct 57244 AGACCAGGCATCAAACCGCGCTTCTTCAGCCAGAAGATGGAGGCGAAAGC-ACCGCTGAA 57302
Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-- 120816
||| | ||||| || || ||||| |||| |||| || | || | | || ||
Sbjct 57303 GAAGATACCCTCAACAGCAGCGAAGGCAACCAGACGCTGAGCGTAGGTAGAC-TCGTGGT 57361
Query 120817 CTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
| || ||||||||||| |||||| |||||||| || || | ||| ||
Sbjct 57362 CCGT-GATCCACTTCAGGGCCCAGTCGGCCTTCTTACGGATGCAGGG 57407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417929689000
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