Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2 132 6e-26 >seq2 Length=950389 Score = 132 bits (146), Expect = 6e-26 Identities = 272/399 (68%), Gaps = 4/399 (1%) Strand=Plus/Minus Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 |||||| ||||| ||| | ||||| || |||||||||||||| || ||| |||| Sbjct 623842 CACGTAGAACTGCGCAAAC-ATGTGACAAGGCGGCAGCGCCATCTTCTTCAAGTCGGCGG 623784 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | | | || | | | |||||| || | || | || | Sbjct 623783 GGTTCCACGCGCTCATGATGATGCGGCGGTCGTACGGGTTCGTCCGCAGCTTGTGGACGA 623724 Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGG 147283 || ||||||||| |||||||||||| ||||| || | | ||| |||||| || Sbjct 623723 CCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGTGCGGGCGTCGACGTACTCGG 623664 Query 147284 CCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCG 147343 | || ||||| | ||||||||| |||||||| || ||||||||||||| || | ||| | Sbjct 623663 CGCCGAAGTGGCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCGGCCTCGCGGTG-G 623605 Query 147344 AGAAGCCCG-CCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 |||||| | | | ||| |||||| | || |||| | |||||||||| || ||| Sbjct 623604 CCGAGCCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCC 623545 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAA 147462 | | || ||| || ||| | ||| | || ||||||||| ||||| | | Sbjct 623544 TGCTCCGACAGCGAGAGCGACGACGTCGCGCCGCTGACGAACCAGAGGAGCTCGGCGAGC 623485 Query 147463 ACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGG 147501 || ||| ||||| | |||||| ||||| |||||| Sbjct 623484 ACGGCCCGGTGGAAGACGCGCTTGGTCGTCAGGAGGGGG 623446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484535540000