Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq4 105 6e-18
seq14 91.5 1e-13
>seq4
Length=784365
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | ||||| || | || || || || || ||||||||||| |
Sbjct 46710 CCACCACGCAGACGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATATTGTAGTCAGAC 46769
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | ||||| | ||| || || ||| | ||||||||||| || || || ||
Sbjct 46770 AGCGTCCGGCCATCTTCCAACTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGTGGG 46829
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| | |||| | | || | ||||||| || || ||
Sbjct 46830 ATTCCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGACTCCACC 46889
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| ||||| | ||| ||||||| || || || ||||| ||||||
Sbjct 46890 TCTAGTGTTATCGTTTTTCCCGTCAATGTCTTGACGAAGATCTGCATA 46937
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| || || ||||| ||||||||| || | || |||| |||
Sbjct 46956 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGACCGTCCTCG 47015
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || ||||| | || || ||||| || || || || | ||||| || || |
Sbjct 47016 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 47075
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| || | | || | |||||| | || || || || ||||| || | |||
Sbjct 47076 ATCTTGGACTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 47135
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || || |||||||||||||||
Sbjct 47136 CCAGTGAGGGTCTTGACAAAGATTTGCATA 47165
>seq14
Length=442650
Score = 91.5 bits (100), Expect = 1e-13
Identities = 279/431 (65%), Gaps = 3/431 (1%)
Strand=Plus/Plus
Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662
|| || ||| |||| ||||| || | ||| ||||||||| ||||| |||||||| ||
Sbjct 88334 GGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAG 88393
Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722
| || || | ||| | || || || || | ||| ||| || ||||
Sbjct 88394 AGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGG 88453
Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782
| ||| ||| | | || || || | || || ||||| || |||| || | ||
Sbjct 88454 TTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCG 88513
Query 131783 ATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839
| || || |||||| || || || | ||| | ||| | |||||||| | ||
Sbjct 88514 AAAGCACCAGGACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACA 88573
Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899
|| | |||||| | |||||| | | || ||||| | ||||| |||| ||
Sbjct 88574 CGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTG 88633
Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCAT 131959
|| | ||| ||| ||||| || |||||||||||| | || ||||| | |||||
Sbjct 88634 GCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAA 88693
Query 131960 TTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAA 132019
| | ||||| | ||||||||||| | ||||| | |||||||| | |||||
Sbjct 88694 GTCTTGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCAC 88753
Query 132020 GAGGACAACTG 132030
|| ||||||||
Sbjct 88754 GACGACAACTG 88764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424931940028200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |