Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq88 102 3e-16 >seq88 Length=140259 Score = 102 bits (112), Expect = 3e-16 Identities = 120/161 (75%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || || || |||| || || || | || || ||||| ||||| |||||| Sbjct 57340 AGCGTCTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGT-GCTTTCGCCTCC 57282 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| |||| ||||| || | |||| ||||||||||| ||||| |||||| Sbjct 57281 ATCTTCTGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATC 57222 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| ||||||||| |||| |||||||| || || || Sbjct 57221 TCTCGTGACGAGGGTCTGCACACTGACTTCGCTTGCCTGCT 57181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588326333486375