Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq14 298 7e-76 seq35 82.4 1e-10 >seq14 Length=442650 Score = 298 bits (330), Expect = 7e-76 Identities = 1162/1805 (64%), Gaps = 51/1805 (3%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||||||||| ||| || ||||| | ||||| |||||||| || |||||||| | Sbjct 87150 TGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 87209 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | ||||| || || |||| |||||| || || | |||| Sbjct 87210 CCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTGGG-CTCACGCATG 87268 Query 110450 AAGAGGTTCATA--CTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507 || ||| | | || |||| |||| |||||| || || | || | ||| | | Sbjct 87269 TGGATGTTGAGAGACTGCGACT--GGTCGATGAAGGCACCGCGGTCAGCAGACATCTGCA 87326 Query 110508 TGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564 || | || ||| | | |||||| || || || | | ||||||||| | | Sbjct 87327 ---CAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCG 87383 Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA-TGAGA---TCCTTCATA 110620 |||| | ||| |||||||| ||||| | ||| || ||| | | ||||||| Sbjct 87384 GGATGCTGGGGATGTTCTGGATAGAACCATC----TTCGGCAATGATACGGTTCTTCATA 87439 Query 110621 TCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACA 110680 ||| ||||| |||||||||| | ||||| ||| || |||||| | Sbjct 87440 GCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACCTGG 87499 Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740 ||||| || || || | || | |||||||||| | |||||||| || ||||| || Sbjct 87500 AACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCG 87559 Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800 || || |||| || || | ||||| || || ||||| || |||||||| | ||||| Sbjct 87560 TTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTGTTT 87619 Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGG 110858 || | ||| | ||||||||| | |||| | | |||||||||| | | | || || Sbjct 87620 CGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAGAA-GG 87678 Query 110859 TTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGG 110918 | || ||||||||||| | |||||| || || || |||| || ||||| | | Sbjct 87679 CTGGACGC-CCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGTATG 87737 Query 110919 TTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACA 110978 | | || | || | | | || | || || ||| || | ||||| || | Sbjct 87738 TCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGTAGA 87797 Query 110979 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 111038 |||| || ||||| | |||| || || ||| || ||||||| |||| Sbjct 87798 TGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGCATGCGGA 87857 Query 111039 ACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 111098 | || |||| || ||||| || ||||| | |||||| || ||||||||||| | Sbjct 87858 GAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGT 87917 Query 111099 TAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTT 111158 | || || || ||||| || || ||||||| ||| || || Sbjct 87918 TGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGC 87977 Query 111159 TGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT 111218 ||| | || |||| || || || | | | | | || | | ||| | Sbjct 87978 GAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTA---GCAGTTGTTTTCGT 88034 Query 111219 TG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTAT 111275 | ||||| ||| || || || || |||| ||||| |||||| |||||| | Sbjct 88035 AGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAG 88094 Query 111276 CTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTT 111335 | |||||| | || || || || | |||||| || || || |||| ||||| | Sbjct 88095 CACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCT 88154 Query 111336 GGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCT 111395 |||| ||||| |||||| |||||||||||||||||| | || | || ||||| |||| Sbjct 88155 GGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCT 88214 Query 111396 GTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTG--GCC-CGT 111451 | | | ||| || || | ||| | | || | | || |||| ||| ||| || Sbjct 88215 GGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTC----ATGGTCTTGCGGCCGCGG 88270 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511 || || ||||||||| ||| || || || ||||| ||||| ||| | || Sbjct 88271 CCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGG 88330 Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571 || || || || || || | || | ||| | || | |||||||||||||||| Sbjct 88331 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 88390 Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631 || ||||| |||||||| || | ||||| || | || |||| || | ||| Sbjct 88391 AAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCG 88450 Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691 ||||| ||| || || |||||||| | || ||| |||||||||||||| || |||| Sbjct 88451 TGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 88510 Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745 |||| || || ||||| ||| | || | || || || || ||| ||| Sbjct 88511 GCGAAAGCACCAG---GACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTG 88567 Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 111805 || || |||||||| ||||| ||||| | ||| || || || || || ||| Sbjct 88568 AAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAG 88627 Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TT 111863 | |||| | | | |||| || || |||||||| || ||| ||| ||||| | Sbjct 88628 CCAGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATG 88687 Query 111864 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 111923 ||||| | || | ||||| | |||||||| | || ||| ||||| || ||| | Sbjct 88688 GCGCA-AGTCT-TGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGA 88745 Query 111924 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 111983 ||||||| |||| ||| || || |||||||||||||| || || || | ||||| Sbjct 88746 GGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGT 88805 Query 111984 GAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 112043 | |||| | || |||||| || ||| ||||| | || ||||| || || | Sbjct 88806 GCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTC 88865 Query 112044 CGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCAT 112103 | ||| || | || || ||||||| ||||| |||||| ||| | || |||||| Sbjct 88866 CCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCAT 88925 Query 112104 CGAGC 112108 ||||| Sbjct 88926 CGAGC 88930 >seq35 Length=278380 Score = 82.4 bits (90), Expect = 1e-10 Identities = 162/237 (68%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 181810 TACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTG 181869 |||||||| ||||| | ||| || | ||| | || || || | || |||||||| | Sbjct 230192 TACCACCCGCAAGACGAGAACCGAAGTTACCGCTGGGTTCCAGGATATTTATGTTGTTCG 230133 Query 181870 AACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCC-GCAAGGGACACTTCACCGTGG 181928 | ||| | ||| | |||||| || ||| || | | |||| | | |||||||||||| Sbjct 230132 AGCCTACAAAGTTTTGGGCCAAGCCAATGATCGTTTGCTGCAAAG-AGACTTCACCGTGG 230074 Query 181929 TGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTG 181988 |||||||||| || || | | || | ||||||| | |||||| | || | | Sbjct 230073 TGGTAAGCTGTCTGTTCGGAGATGTAACCGGCCAACTCAACGACCTTCTTGTCTTTGGTC 230014 Query 181989 AGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATCC 182045 | ||| | |||||| || || || ||||||||||| || || ||||| ||| Sbjct 230013 AAGTTACGCTTGAAGCAGGCGTAAATGACTTTCCTCTGACCTGGTTTCAGACCGTCC 229957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028271060000