Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq14 298 7e-76
seq35 82.4 1e-10
>seq14
Length=442650
Score = 298 bits (330), Expect = 7e-76
Identities = 1162/1805 (64%), Gaps = 51/1805 (3%)
Strand=Plus/Plus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
|||||||||| ||| || ||||| | ||||| |||||||| || |||||||| |
Sbjct 87150 TGAACTGAATGGGTGCTGCCGCCGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 87209
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449
| | ||||| || | ||||| || || |||| |||||| || || | ||||
Sbjct 87210 CCAGCTTCCAGCCGGTGAAGTGCATGCTAGTGATCTTGCCCATCGTGGG-CTCACGCATG 87268
Query 110450 AAGAGGTTCATA--CTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507
|| ||| | | || |||| |||| |||||| || || | || | ||| | |
Sbjct 87269 TGGATGTTGAGAGACTGCGACT--GGTCGATGAAGGCACCGCGGTCAGCAGACATCTGCA 87326
Query 110508 TGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564
|| | || ||| | | |||||| || || || | | ||||||||| | |
Sbjct 87327 ---CAATCGTCCTCTGAGAGACTTCCCAGACGGTCTTGTACAAAGCCTTGATATCGGCCG 87383
Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA-TGAGA---TCCTTCATA 110620
|||| | ||| |||||||| ||||| | ||| || ||| | | |||||||
Sbjct 87384 GGATGCTGGGGATGTTCTGGATAGAACCATC----TTCGGCAATGATACGGTTCTTCATA 87439
Query 110621 TCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACA 110680
||| ||||| |||||||||| | ||||| ||| || |||||| |
Sbjct 87440 GCCTCAGACCACAGACCAATCTCTGTCAGGTCCCTGAGTAGCCAGGGGTTGACGACCTGG 87499
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
||||| || || || | || | |||||||||| | |||||||| || ||||| ||
Sbjct 87500 AACTCGCCAGCAAGCACACGTCGCTGGTAGATGTTAGAGGTGTATGGCTCGAAGCACTCG 87559
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
|| || |||| || || | ||||| || || ||||| || |||||||| | |||||
Sbjct 87560 TTGTTGCCCAGAATCTGCGATGTGGATGCGGTAGGCATGGGCGCCATCAACAAGCTGTTT 87619
Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGG 110858
|| | ||| | ||||||||| | |||| | | |||||||||| | | | || ||
Sbjct 87620 CGGATACCGTGCTCCTTGATCTTTGCCTTCAAAGCATCCCAGTCCCAAAGATCAGAA-GG 87678
Query 110859 TTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGG 110918
| || ||||||||||| | |||||| || || || |||| || ||||| | |
Sbjct 87679 CTGGACGC-CCCACATGTCATATTGAAGCTGTCCCTGCGAGACGGGGGATCCCTCGTATG 87737
Query 110919 TTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACA 110978
| | || | || | | | || | || || ||| || | ||||| || |
Sbjct 87738 TCTGGTATGGGCCGTCAACCTTGGCGATGTCGCAAGACGCAGTCAAAGCAGCGTGGTAGA 87797
Query 110979 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 111038
|||| || ||||| | |||| || || ||| || ||||||| ||||
Sbjct 87798 TGGTCTCGAAGATCTGTTTGTTCAGCTGGCGAGCCTCAGGGGACTCAAATGGCATGCGGA 87857
Query 111039 ACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 111098
| || |||| || ||||| || ||||| | |||||| || ||||||||||| |
Sbjct 87858 GAGCCAAGAAGGCATCGGCAAGACCCTGGACACCAACACCAATGGGCCTGTGTCGCATGT 87917
Query 111099 TAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTT 111158
| || || || ||||| || || ||||||| ||| || ||
Sbjct 87918 TGCTGTTGTATGCCTCCTTCACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGC 87977
Query 111159 TGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT 111218
||| | || |||| || || || | | | | | || | | ||| |
Sbjct 87978 GAACAACGACCTGGGTGACCTCGTGGAGGTGCTGGAAGTTGTA---GCAGTTGTTTTCGT 88034
Query 111219 TG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTAT 111275
| ||||| ||| || || || || |||| ||||| |||||| |||||| |
Sbjct 88035 AGTCAACATATGCTGGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAG 88094
Query 111276 CTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTT 111335
| |||||| | || || || || | |||||| || || || |||| ||||| |
Sbjct 88095 CACAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCT 88154
Query 111336 GGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCT 111395
|||| ||||| |||||| |||||||||||||||||| | || | || ||||| ||||
Sbjct 88155 GGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCT 88214
Query 111396 GTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTG--GCC-CGT 111451
| | | ||| || || | ||| | | || | | || |||| ||| ||| ||
Sbjct 88215 GGGCCTCGAGGATGGCGTACCACAGCTTCTGAGCCTTC----ATGGTCTTGCGGCCGCGG 88270
Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511
|| || ||||||||| ||| || || || ||||| ||||| ||| | ||
Sbjct 88271 CCTTCTCTCTCGTACTTCTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGG 88330
Query 111512 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATG 111571
|| || || || || || | || | ||| | || | ||||||||||||||||
Sbjct 88331 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 88390
Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631
|| ||||| |||||||| || | ||||| || | || |||| || | |||
Sbjct 88391 AAGAGGTCAGGAATCCAGAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCG 88450
Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691
||||| ||| || || |||||||| | || ||| |||||||||||||| || ||||
Sbjct 88451 TGGTTCTTTCGCAAGTCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATA 88510
Query 111692 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 111745
|||| || || ||||| ||| | || | || || || || ||| |||
Sbjct 88511 GCGAAAGCACCAG---GACGCTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTG 88567
Query 111746 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 111805
|| || |||||||| ||||| ||||| | ||| || || || || || |||
Sbjct 88568 AAGACACGAAGCATGGGAATGATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAG 88627
Query 111806 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TT 111863
| |||| | | | |||| || || |||||||| || ||| ||| ||||| |
Sbjct 88628 CCAGTGGCACGGATACGGTGGACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATG 88687
Query 111864 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 111923
||||| | || | ||||| | |||||||| | || ||| ||||| || ||| |
Sbjct 88688 GCGCA-AGTCT-TGAGAGTATCGTAGATACCTTCAATACTGTCATCCTTCATGTCGACGA 88745
Query 111924 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 111983
||||||| |||| ||| || || |||||||||||||| || || || | |||||
Sbjct 88746 GGAAGCACGACGACAACTGAGGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGT 88805
Query 111984 GAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 112043
| |||| | || |||||| || ||| ||||| | || ||||| || || |
Sbjct 88806 GCGTGAAGAATTTGTGCGACATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTC 88865
Query 112044 CGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCAT 112103
| ||| || | || || ||||||| ||||| |||||| ||| | || ||||||
Sbjct 88866 CCCAGATACCAACAGCAACACGCATGATCATGTGCTGTGGCCGTTCGACGACTTTGCCAT 88925
Query 112104 CGAGC 112108
|||||
Sbjct 88926 CGAGC 88930
>seq35
Length=278380
Score = 82.4 bits (90), Expect = 1e-10
Identities = 162/237 (68%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 181810 TACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTG 181869
|||||||| ||||| | ||| || | ||| | || || || | || |||||||| |
Sbjct 230192 TACCACCCGCAAGACGAGAACCGAAGTTACCGCTGGGTTCCAGGATATTTATGTTGTTCG 230133
Query 181870 AACCTGTATAGTCGTTGGCCAACTTAACGATGGTATCC-GCAAGGGACACTTCACCGTGG 181928
| ||| | ||| | |||||| || ||| || | | |||| | | ||||||||||||
Sbjct 230132 AGCCTACAAAGTTTTGGGCCAAGCCAATGATCGTTTGCTGCAAAG-AGACTTCACCGTGG 230074
Query 181929 TGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTG 181988
|||||||||| || || | | || | ||||||| | |||||| | || | |
Sbjct 230073 TGGTAAGCTGTCTGTTCGGAGATGTAACCGGCCAACTCAACGACCTTCTTGTCTTTGGTC 230014
Query 181989 AGGTTCTTGTGGAAGCAAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATCC 182045
| ||| | |||||| || || || ||||||||||| || || ||||| |||
Sbjct 230013 AAGTTACGCTTGAAGCAGGCGTAAATGACTTTCCTCTGACCTGGTTTCAGACCGTCC 229957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628028271060000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |